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Cluster: HRGMv2_3983_CGC66

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3983_13 HRGMv2_3983_13_57 81294 83765 - GH95
pfam HRGMv2_3983_13 HRGMv2_3983_13_58 83910 84275 + YjbR
TC HRGMv2_3983_13 HRGMv2_3983_13_59 84344 85597 - 2.A.6.1.5
TC HRGMv2_3983_13 HRGMv2_3983_13_60 85572 88679 - 2.A.6.1.6
TC HRGMv2_3983_13 HRGMv2_3983_13_61 88686 89771 - 2.A.6.1.4
TC HRGMv2_3983_13 HRGMv2_3983_13_62 90234 91442 + 2.A.1.21.22
NULL(UNKNOWN) HRGMv2_3983_13 HRGMv2_3983_13_63 91537 92160 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3983_13 HRGMv2_3983_13_64 92307 94436 + 2.A.37.2.5
Gene ID: HRGMv2_3983_13_57
Type: CAZyme
Location: 81294 - 83765 (-)
Gene ID: HRGMv2_3983_13_58
Type: pfam
Location: 83910 - 84275 (+)
Gene ID: HRGMv2_3983_13_59
Type: TC
Location: 84344 - 85597 (-)
Gene ID: HRGMv2_3983_13_60
Type: TC
Location: 85572 - 88679 (-)
Gene ID: HRGMv2_3983_13_61
Type: TC
Location: 88686 - 89771 (-)
Gene ID: HRGMv2_3983_13_62
Type: TC
Location: 90234 - 91442 (+)
Gene ID: HRGMv2_3983_13_63
Type:
Location: 91537 - 92160 (-)
Gene ID: HRGMv2_3983_13_64
Type: TC
Location: 92307 - 94436 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3983_13_62 vegan > omnivore 2.57300 0.00229
HRGMv2_3983_13_62 vegetarian > omnivore 1.57460 0.03246

🧭 Explore Read Mapping of CGC

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