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Cluster: HRGMv2_3983_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3983_13 HRGMv2_3983_13_29 34403 37474 - 1.B.14.6.1
pfam HRGMv2_3983_13 HRGMv2_3983_13_30 37511 39349 - SusD_RagB | SusD-like_3
TC HRGMv2_3983_13 HRGMv2_3983_13_31 39399 42572 - 1.B.14.6.1
sulfatase HRGMv2_3983_13 HRGMv2_3983_13_32 42601 44019 - S1_20
CAZyme HRGMv2_3983_13 HRGMv2_3983_13_33 44128 45150 - GH159
sulfatase HRGMv2_3983_13 HRGMv2_3983_13_34 45147 47012 - S1_8
sulfatase HRGMv2_3983_13 HRGMv2_3983_13_35 47045 48448 - S1_8
CAZyme HRGMv2_3983_13 HRGMv2_3983_13_36 48460 50871 - GH2
Gene ID: HRGMv2_3983_13_29
Type: TC
Location: 34403 - 37474 (-)
Gene ID: HRGMv2_3983_13_30
Type: pfam
Location: 37511 - 39349 (-)
Gene ID: HRGMv2_3983_13_31
Type: TC
Location: 39399 - 42572 (-)
Gene ID: HRGMv2_3983_13_32
Type: sulfatase
Location: 42601 - 44019 (-)
Gene ID: HRGMv2_3983_13_33
Type: CAZyme
Location: 44128 - 45150 (-)
Gene ID: HRGMv2_3983_13_34
Type: sulfatase
Location: 45147 - 47012 (-)
Gene ID: HRGMv2_3983_13_35
Type: sulfatase
Location: 47045 - 48448 (-)
Gene ID: HRGMv2_3983_13_36
Type: CAZyme
Location: 48460 - 50871 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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