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Cluster: HRGMv2_3983_CGC60

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3983_12 HRGMv2_3983_12_19 34733 35809 - GH5_13
TC HRGMv2_3983_12 HRGMv2_3983_12_20 35832 37310 - 8.A.46.3.2
TC HRGMv2_3983_12 HRGMv2_3983_12_21 37331 40543 - 1.B.14.6.1
Gene ID: HRGMv2_3983_12_19
Type: CAZyme
Location: 34733 - 35809 (-)
Gene ID: HRGMv2_3983_12_20
Type: TC
Location: 35832 - 37310 (-)
Gene ID: HRGMv2_3983_12_21
Type: TC
Location: 37331 - 40543 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3983_12_21 vegan > omnivore 1.12760 0.00229

🧭 Explore Read Mapping of CGC

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