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Cluster: HRGMv2_3983_CGC59

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3983_11 HRGMv2_3983_11_106 151230 153239 + GH97
CAZyme HRGMv2_3983_11 HRGMv2_3983_11_107 153252 154322 + GH43_17
CAZyme HRGMv2_3983_11 HRGMv2_3983_11_108 154355 155806 + CE20
NULL(UNKNOWN) HRGMv2_3983_11 HRGMv2_3983_11_109 155888 156244 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3983_11 HRGMv2_3983_11_110 156538 157146 - 2.A.124.1.2
TC HRGMv2_3983_11 HRGMv2_3983_11_111 157143 157430 - 2.A.124.1.2
NULL(UNKNOWN) HRGMv2_3983_11 HRGMv2_3983_11_112 157576 157881 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3983_11 HRGMv2_3983_11_113 157860 158531 + 1.B.42.1.2
pfam HRGMv2_3983_11 HRGMv2_3983_11_114 158528 159532 - DUF4249
TC HRGMv2_3983_11 HRGMv2_3983_11_115 159540 162218 - 1.B.14.6.12
Gene ID: HRGMv2_3983_11_106
Type: CAZyme
Location: 151230 - 153239 (+)
Gene ID: HRGMv2_3983_11_107
Type: CAZyme
Location: 153252 - 154322 (+)
Gene ID: HRGMv2_3983_11_108
Type: CAZyme
Location: 154355 - 155806 (+)
Gene ID: HRGMv2_3983_11_109
Type:
Location: 155888 - 156244 (-)
Gene ID: HRGMv2_3983_11_110
Type: TC
Location: 156538 - 157146 (-)
Gene ID: HRGMv2_3983_11_111
Type: TC
Location: 157143 - 157430 (-)
Gene ID: HRGMv2_3983_11_112
Type:
Location: 157576 - 157881 (+)
Gene ID: HRGMv2_3983_11_113
Type: TC
Location: 157860 - 158531 (+)
Gene ID: HRGMv2_3983_11_114
Type: pfam
Location: 158528 - 159532 (-)
Gene ID: HRGMv2_3983_11_115
Type: TC
Location: 159540 - 162218 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3983_11_110 vegan > omnivore 1.33292 0.00229

🧭 Explore Read Mapping of CGC

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