dbCAN HGM

Cluster: HRGMv2_3983_CGC58

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_3983_11	HRGMv2_3983_11_83	110875	112611	+	CBM91 \| GH43_12
TC	HRGMv2_3983_11	HRGMv2_3983_11_84	112740	115886	+	1.B.14.6.1
pfam	HRGMv2_3983_11	HRGMv2_3983_11_85	115897	117897	+	SusD_RagB \| SusD-like_3
TC	HRGMv2_3983_11	HRGMv2_3983_11_86	117940	120774	+	1.B.14.6.1
pfam	HRGMv2_3983_11	HRGMv2_3983_11_87	120810	122597	+	SusD_RagB \| SusD-like_3
pfam	HRGMv2_3983_11	HRGMv2_3983_11_88	122630	123688	+	BT_3987-like_N \| DUF5627
CAZyme	HRGMv2_3983_11	HRGMv2_3983_11_89	123708	125870	+	GH10
CAZyme	HRGMv2_3983_11	HRGMv2_3983_11_90	125994	127307	+	GH5_21
CAZyme	HRGMv2_3983_11	HRGMv2_3983_11_91	127329	128480	+	CE1

Gene ID: HRGMv2_3983_11_83
Type: CAZyme
Location: 110875 - 112611 (+)

Gene ID: HRGMv2_3983_11_84
Type: TC
Location: 112740 - 115886 (+)

Gene ID: HRGMv2_3983_11_85
Type: pfam
Location: 115897 - 117897 (+)

Gene ID: HRGMv2_3983_11_86
Type: TC
Location: 117940 - 120774 (+)

Gene ID: HRGMv2_3983_11_87
Type: pfam
Location: 120810 - 122597 (+)

Gene ID: HRGMv2_3983_11_88
Type: pfam
Location: 122630 - 123688 (+)

Gene ID: HRGMv2_3983_11_89
Type: CAZyme
Location: 123708 - 125870 (+)

Gene ID: HRGMv2_3983_11_90
Type: CAZyme
Location: 125994 - 127307 (+)

Gene ID: HRGMv2_3983_11_91
Type: CAZyme
Location: 127329 - 128480 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_3983_11_84	vegan > omnivore	1.15496	0.00229
HRGMv2_3983_11_85	vegan > omnivore	1.22532	0.00229
HRGMv2_3983_11_86	vegan > omnivore	2.82041	0.00229
HRGMv2_3983_11_86	vegetarian > omnivore	2.52874	0.03246
HRGMv2_3983_11_90	vegan > omnivore	1.60453	0.00229
HRGMv2_3983_11_90	vegetarian > omnivore	1.90029	0.02707