Cluster: HRGMv2_3983_CGC50
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: beta-glucan
- Genome ID: HRGMv2_3983
- CGC Family ID: CGCFAM_00265
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3983_8 | HRGMv2_3983_8_115 | 185712 | 188129 | - | GH3 |
| CAZyme | HRGMv2_3983_8 | HRGMv2_3983_8_116 | 188136 | 190448 | - | GH3 |
| CAZyme | HRGMv2_3983_8 | HRGMv2_3983_8_117 | 190474 | 192108 | - | GH5_38 |
| NULL(UNKNOWN) | HRGMv2_3983_8 | HRGMv2_3983_8_118 | 192131 | 192511 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3983_8 | HRGMv2_3983_8_119 | 192547 | 194142 | - | SusD-like | SusD-like_2 |
| TC | HRGMv2_3983_8 | HRGMv2_3983_8_120 | 194186 | 197365 | - | 1.B.14.6.2 |
Gene ID: HRGMv2_3983_8_115
Type: CAZyme
Location: 185712 - 188129 (-)
Type: CAZyme
Location: 185712 - 188129 (-)
Gene ID: HRGMv2_3983_8_116
Type: CAZyme
Location: 188136 - 190448 (-)
Type: CAZyme
Location: 188136 - 190448 (-)
Gene ID: HRGMv2_3983_8_117
Type: CAZyme
Location: 190474 - 192108 (-)
Type: CAZyme
Location: 190474 - 192108 (-)
Gene ID: HRGMv2_3983_8_118
Type:
Location: 192131 - 192511 (-)
Type:
Location: 192131 - 192511 (-)
Gene ID: HRGMv2_3983_8_119
Type: pfam
Location: 192547 - 194142 (-)
Type: pfam
Location: 192547 - 194142 (-)
Gene ID: HRGMv2_3983_8_120
Type: TC
Location: 194186 - 197365 (-)
Type: TC
Location: 194186 - 197365 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp014750685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.