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Cluster: HRGMv2_3983_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3983_1 HRGMv2_3983_1_85 151141 152853 - GH35
NULL(UNKNOWN) HRGMv2_3983_1 HRGMv2_3983_1_86 153048 153578 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_3983_1 HRGMv2_3983_1_87 155133 156440 - ATPase_2
CAZyme HRGMv2_3983_1 HRGMv2_3983_1_88 156652 158898 - GH3
pfam HRGMv2_3983_1 HRGMv2_3983_1_89 159105 161669 - Lipase_GDSL_2
pfam HRGMv2_3983_1 HRGMv2_3983_1_90 161706 163721 - DUF5016 | DUF5125 | DUF5121
CAZyme HRGMv2_3983_1 HRGMv2_3983_1_91 163743 165233 - GH30_3
pfam HRGMv2_3983_1 HRGMv2_3983_1_92 165264 166799 - SusD_RagB | SusD-like_3
TC HRGMv2_3983_1 HRGMv2_3983_1_93 166799 169804 - 1.B.14.6.1
pfam HRGMv2_3983_1 HRGMv2_3983_1_94 170014 171657 - DUF6377
CAZyme HRGMv2_3983_1 HRGMv2_3983_1_95 171780 174284 - GH20
Gene ID: HRGMv2_3983_1_85
Type: CAZyme
Location: 151141 - 152853 (-)
Gene ID: HRGMv2_3983_1_86
Type:
Location: 153048 - 153578 (-)
Gene ID: HRGMv2_3983_1_87
Type: STP
Location: 155133 - 156440 (-)
Gene ID: HRGMv2_3983_1_88
Type: CAZyme
Location: 156652 - 158898 (-)
Gene ID: HRGMv2_3983_1_89
Type: pfam
Location: 159105 - 161669 (-)
Gene ID: HRGMv2_3983_1_90
Type: pfam
Location: 161706 - 163721 (-)
Gene ID: HRGMv2_3983_1_91
Type: CAZyme
Location: 163743 - 165233 (-)
Gene ID: HRGMv2_3983_1_92
Type: pfam
Location: 165264 - 166799 (-)
Gene ID: HRGMv2_3983_1_93
Type: TC
Location: 166799 - 169804 (-)
Gene ID: HRGMv2_3983_1_94
Type: pfam
Location: 170014 - 171657 (-)
Gene ID: HRGMv2_3983_1_95
Type: CAZyme
Location: 171780 - 174284 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3983_1_93 vegetarian > omnivore 1.00872 0.01498

🧭 Explore Read Mapping of CGC

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