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Cluster: HRGMv2_3983_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3983_8 HRGMv2_3983_8_90 150134 153253 + 1.B.14.6.1
TC HRGMv2_3983_8 HRGMv2_3983_8_91 153267 154784 + 8.A.46.1.5
pfam HRGMv2_3983_8 HRGMv2_3983_8_92 154806 156491 + TIG
CAZyme HRGMv2_3983_8 HRGMv2_3983_8_93 156495 158759 + PL6 | PL6_1
CAZyme HRGMv2_3983_8 HRGMv2_3983_8_94 158804 161011 + PL17_2 | PL17_2
pfam HRGMv2_3983_8 HRGMv2_3983_8_95 161035 161379 + Cupin_2
TC HRGMv2_3983_8 HRGMv2_3983_8_96 161384 162850 + 2.A.1.14.25
pfam HRGMv2_3983_8 HRGMv2_3983_8_97 162875 163627 + adh_short | KR | adh_short_C2 | SDR
CAZyme HRGMv2_3983_8 HRGMv2_3983_8_98 163715 164917 + PL38
Gene ID: HRGMv2_3983_8_90
Type: TC
Location: 150134 - 153253 (+)
Gene ID: HRGMv2_3983_8_91
Type: TC
Location: 153267 - 154784 (+)
Gene ID: HRGMv2_3983_8_92
Type: pfam
Location: 154806 - 156491 (+)
Gene ID: HRGMv2_3983_8_93
Type: CAZyme
Location: 156495 - 158759 (+)
Gene ID: HRGMv2_3983_8_94
Type: CAZyme
Location: 158804 - 161011 (+)
Gene ID: HRGMv2_3983_8_95
Type: pfam
Location: 161035 - 161379 (+)
Gene ID: HRGMv2_3983_8_96
Type: TC
Location: 161384 - 162850 (+)
Gene ID: HRGMv2_3983_8_97
Type: pfam
Location: 162875 - 163627 (+)
Gene ID: HRGMv2_3983_8_98
Type: CAZyme
Location: 163715 - 164917 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3983_8_91 vegan > omnivore 1.62501 0.00229
HRGMv2_3983_8_91 vegetarian > omnivore 1.09022 0.03246

🧭 Explore Read Mapping of CGC

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