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Cluster: HRGMv2_3983_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3983_8 HRGMv2_3983_8_64 105377 108379 + 1.B.14.6.1
TC HRGMv2_3983_8 HRGMv2_3983_8_65 108416 109903 + 8.A.46.1.3
pfam HRGMv2_3983_8 HRGMv2_3983_8_66 109915 111387 + SusE | SusF_SusE | SusF_SusE
CAZyme HRGMv2_3983_8 HRGMv2_3983_8_67 111410 113176 + GH66
CAZyme HRGMv2_3983_8 HRGMv2_3983_8_68 113443 115962 + GH31
STP HRGMv2_3983_8 HRGMv2_3983_8_69 116254 116847 + Sigma70_r2 | Sigma70_r4_2
STP HRGMv2_3983_8 HRGMv2_3983_8_70 116994 118187 + FecR
TC HRGMv2_3983_8 HRGMv2_3983_8_71 118309 121728 + 1.B.14.6.1
Gene ID: HRGMv2_3983_8_64
Type: TC
Location: 105377 - 108379 (+)
Gene ID: HRGMv2_3983_8_65
Type: TC
Location: 108416 - 109903 (+)
Gene ID: HRGMv2_3983_8_66
Type: pfam
Location: 109915 - 111387 (+)
Gene ID: HRGMv2_3983_8_67
Type: CAZyme
Location: 111410 - 113176 (+)
Gene ID: HRGMv2_3983_8_68
Type: CAZyme
Location: 113443 - 115962 (+)
Gene ID: HRGMv2_3983_8_69
Type: STP
Location: 116254 - 116847 (+)
Gene ID: HRGMv2_3983_8_70
Type: STP
Location: 116994 - 118187 (+)
Gene ID: HRGMv2_3983_8_71
Type: TC
Location: 118309 - 121728 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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