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Cluster: HRGMv2_3983_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3983_5 HRGMv2_3983_5_179 230350 233577 - 1.B.14.6.1
pfam HRGMv2_3983_5 HRGMv2_3983_5_180 234146 235081 + Phage_integrase | Phage_int_SAM_5
NULL(UNKNOWN) HRGMv2_3983_5 HRGMv2_3983_5_181 235456 238407 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3983_5 HRGMv2_3983_5_182 238542 239648 + 1.B.6.1.6
CAZyme HRGMv2_3983_5 HRGMv2_3983_5_183 239883 240872 + GT2
pfam HRGMv2_3983_5 HRGMv2_3983_5_184 241146 241841 + RadC | UPF0758_N
TF HRGMv2_3983_5 HRGMv2_3983_5_185 241890 245813 - HTH_AraC
TC HRGMv2_3983_5 HRGMv2_3983_5_186 246096 249422 + 1.B.14.6.1
Gene ID: HRGMv2_3983_5_179
Type: TC
Location: 230350 - 233577 (-)
Gene ID: HRGMv2_3983_5_180
Type: pfam
Location: 234146 - 235081 (+)
Gene ID: HRGMv2_3983_5_181
Type:
Location: 235456 - 238407 (+)
Gene ID: HRGMv2_3983_5_182
Type: TC
Location: 238542 - 239648 (+)
Gene ID: HRGMv2_3983_5_183
Type: CAZyme
Location: 239883 - 240872 (+)
Gene ID: HRGMv2_3983_5_184
Type: pfam
Location: 241146 - 241841 (+)
Gene ID: HRGMv2_3983_5_185
Type: TF
Location: 241890 - 245813 (-)
Gene ID: HRGMv2_3983_5_186
Type: TC
Location: 246096 - 249422 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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