Cluster: HRGMv2_3983_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: HRGMv2_3983
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3983_4 | HRGMv2_3983_4_108 | 145298 | 146899 | + | GH20 |
| TC | HRGMv2_3983_4 | HRGMv2_3983_4_109 | 147183 | 150461 | + | 1.B.14.6.1 |
| pfam | HRGMv2_3983_4 | HRGMv2_3983_4_110 | 150486 | 152483 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | HRGMv2_3983_4 | HRGMv2_3983_4_111 | 152653 | 153303 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3983_4 | HRGMv2_3983_4_112 | 153296 | 155824 | + | GH95 |
Gene ID: HRGMv2_3983_4_108
Type: CAZyme
Location: 145298 - 146899 (+)
Type: CAZyme
Location: 145298 - 146899 (+)
Gene ID: HRGMv2_3983_4_109
Type: TC
Location: 147183 - 150461 (+)
Type: TC
Location: 147183 - 150461 (+)
Gene ID: HRGMv2_3983_4_110
Type: pfam
Location: 150486 - 152483 (+)
Type: pfam
Location: 150486 - 152483 (+)
Gene ID: HRGMv2_3983_4_111
Type:
Location: 152653 - 153303 (+)
Type:
Location: 152653 - 153303 (+)
Gene ID: HRGMv2_3983_4_112
Type: CAZyme
Location: 153296 - 155824 (+)
Type: CAZyme
Location: 153296 - 155824 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp014750685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.