Cluster: HRGMv2_3983_CGC26
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_3983
- CGC Family ID: CGCFAM_00372
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3983_4 | HRGMv2_3983_4_32 | 43510 | 44715 | + | GH88 |
| TF | HRGMv2_3983_4 | HRGMv2_3983_4_33 | 44793 | 48914 | - | HTH_AraC |
| CAZyme | HRGMv2_3983_4 | HRGMv2_3983_4_34 | 49055 | 50320 | - | GH88 |
| sulfatase | HRGMv2_3983_4 | HRGMv2_3983_4_35 | 50350 | 51768 | - | S1_14 |
| CAZyme | HRGMv2_3983_4 | HRGMv2_3983_4_36 | 51810 | 54809 | - | PL8_3 |
| CAZyme | HRGMv2_3983_4 | HRGMv2_3983_4_37 | 55045 | 57063 | + | PL12_2 |
| CAZyme | HRGMv2_3983_4 | HRGMv2_3983_4_38 | 57571 | 60126 | - | PL15 |
| pfam | HRGMv2_3983_4 | HRGMv2_3983_4_39 | 60221 | 61855 | - | DUF6562 |
| pfam | HRGMv2_3983_4 | HRGMv2_3983_4_40 | 61895 | 62908 | - | DUF6562 |
| TC | HRGMv2_3983_4 | HRGMv2_3983_4_41 | 62921 | 63721 | - | 9.B.171.1.2 |
| CAZyme | HRGMv2_3983_4 | HRGMv2_3983_4_42 | 63735 | 66332 | - | PL15_2 |
| TC | HRGMv2_3983_4 | HRGMv2_3983_4_43 | 66363 | 68045 | - | 8.A.46.1.3 |
| TC | HRGMv2_3983_4 | HRGMv2_3983_4_44 | 68073 | 71219 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_3983_4 | HRGMv2_3983_4_45 | 71923 | 73329 | - | GH29 |
Gene ID: HRGMv2_3983_4_32
Type: CAZyme
Location: 43510 - 44715 (+)
Type: CAZyme
Location: 43510 - 44715 (+)
Gene ID: HRGMv2_3983_4_33
Type: TF
Location: 44793 - 48914 (-)
Type: TF
Location: 44793 - 48914 (-)
Gene ID: HRGMv2_3983_4_34
Type: CAZyme
Location: 49055 - 50320 (-)
Type: CAZyme
Location: 49055 - 50320 (-)
Gene ID: HRGMv2_3983_4_35
Type: sulfatase
Location: 50350 - 51768 (-)
Type: sulfatase
Location: 50350 - 51768 (-)
Gene ID: HRGMv2_3983_4_36
Type: CAZyme
Location: 51810 - 54809 (-)
Type: CAZyme
Location: 51810 - 54809 (-)
Gene ID: HRGMv2_3983_4_37
Type: CAZyme
Location: 55045 - 57063 (+)
Type: CAZyme
Location: 55045 - 57063 (+)
Gene ID: HRGMv2_3983_4_38
Type: CAZyme
Location: 57571 - 60126 (-)
Type: CAZyme
Location: 57571 - 60126 (-)
Gene ID: HRGMv2_3983_4_39
Type: pfam
Location: 60221 - 61855 (-)
Type: pfam
Location: 60221 - 61855 (-)
Gene ID: HRGMv2_3983_4_40
Type: pfam
Location: 61895 - 62908 (-)
Type: pfam
Location: 61895 - 62908 (-)
Gene ID: HRGMv2_3983_4_41
Type: TC
Location: 62921 - 63721 (-)
Type: TC
Location: 62921 - 63721 (-)
Gene ID: HRGMv2_3983_4_42
Type: CAZyme
Location: 63735 - 66332 (-)
Type: CAZyme
Location: 63735 - 66332 (-)
Gene ID: HRGMv2_3983_4_43
Type: TC
Location: 66363 - 68045 (-)
Type: TC
Location: 66363 - 68045 (-)
Gene ID: HRGMv2_3983_4_44
Type: TC
Location: 68073 - 71219 (-)
Type: TC
Location: 68073 - 71219 (-)
Gene ID: HRGMv2_3983_4_45
Type: CAZyme
Location: 71923 - 73329 (-)
Type: CAZyme
Location: 71923 - 73329 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp014750685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.