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Cluster: HRGMv2_3983_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3983_3 HRGMv2_3983_3_80 97713 101075 + 1.B.14.6.13
TC HRGMv2_3983_3 HRGMv2_3983_3_81 101081 102682 + 8.A.46.2.2
pfam HRGMv2_3983_3 HRGMv2_3983_3_82 102720 103613 + GH18_BT1044-like
pfam HRGMv2_3983_3 HRGMv2_3983_3_83 103629 104918 + BT_3987-like_N | Laminin_G_3
CAZyme HRGMv2_3983_3 HRGMv2_3983_3_84 104930 106591 + GH18
TC HRGMv2_3983_3 HRGMv2_3983_3_85 106768 108912 + 3.A.7.7.1
NULL(UNKNOWN) HRGMv2_3983_3 HRGMv2_3983_3_86 109123 110043 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_3983_3 HRGMv2_3983_3_87 110293 111348 + C59.UPW
CAZyme HRGMv2_3983_3 HRGMv2_3983_3_88 112102 113451 + CBM32
TC HRGMv2_3983_3 HRGMv2_3983_3_89 113491 116592 + 1.B.14.6.1
Gene ID: HRGMv2_3983_3_80
Type: TC
Location: 97713 - 101075 (+)
Gene ID: HRGMv2_3983_3_81
Type: TC
Location: 101081 - 102682 (+)
Gene ID: HRGMv2_3983_3_82
Type: pfam
Location: 102720 - 103613 (+)
Gene ID: HRGMv2_3983_3_83
Type: pfam
Location: 103629 - 104918 (+)
Gene ID: HRGMv2_3983_3_84
Type: CAZyme
Location: 104930 - 106591 (+)
Gene ID: HRGMv2_3983_3_85
Type: TC
Location: 106768 - 108912 (+)
Gene ID: HRGMv2_3983_3_86
Type:
Location: 109123 - 110043 (-)
Gene ID: HRGMv2_3983_3_87
Type: peptidase
Location: 110293 - 111348 (+)
Gene ID: HRGMv2_3983_3_88
Type: CAZyme
Location: 112102 - 113451 (+)
Gene ID: HRGMv2_3983_3_89
Type: TC
Location: 113491 - 116592 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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