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Cluster: HRGMv2_3983_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3983_3 HRGMv2_3983_3_55 60860 63079 + PL8_3
pfam HRGMv2_3983_3 HRGMv2_3983_3_56 63176 63883 + Diphthami_syn_2
pfam HRGMv2_3983_3 HRGMv2_3983_3_57 63853 64425 - DUF2284
TC HRGMv2_3983_3 HRGMv2_3983_3_58 64489 66174 - 2.A.81.1.2
NULL(UNKNOWN) HRGMv2_3983_3 HRGMv2_3983_3_59 66292 66432 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3983_3 HRGMv2_3983_3_60 66732 67487 - 3.A.1.13.2
TC HRGMv2_3983_3 HRGMv2_3983_3_61 67484 68500 - 3.A.1.13.2
TC HRGMv2_3983_3 HRGMv2_3983_3_62 68497 69630 - 3.A.1.13.2
Gene ID: HRGMv2_3983_3_55
Type: CAZyme
Location: 60860 - 63079 (+)
Gene ID: HRGMv2_3983_3_56
Type: pfam
Location: 63176 - 63883 (+)
Gene ID: HRGMv2_3983_3_57
Type: pfam
Location: 63853 - 64425 (-)
Gene ID: HRGMv2_3983_3_58
Type: TC
Location: 64489 - 66174 (-)
Gene ID: HRGMv2_3983_3_59
Type:
Location: 66292 - 66432 (-)
Gene ID: HRGMv2_3983_3_60
Type: TC
Location: 66732 - 67487 (-)
Gene ID: HRGMv2_3983_3_61
Type: TC
Location: 67484 - 68500 (-)
Gene ID: HRGMv2_3983_3_62
Type: TC
Location: 68497 - 69630 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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