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Cluster: HRGMv2_3983_CGC136

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3983_53 HRGMv2_3983_53_5 8226 9875 + CBM91 | GH43_10
CAZyme HRGMv2_3983_53 HRGMv2_3983_53_6 9925 11145 + GH88
pfam HRGMv2_3983_53 HRGMv2_3983_53_7 11268 11747 - NlpE
TC HRGMv2_3983_53 HRGMv2_3983_53_8 11802 13088 - 9.A.40.2.2
peptidase HRGMv2_3983_53 HRGMv2_3983_53_9 13273 14055 - M48.UPC
TC HRGMv2_3983_53 HRGMv2_3983_53_10 14075 16453 - 1.B.14.6.5
pfam HRGMv2_3983_53 HRGMv2_3983_53_11 16568 17002 + DUF2007
CAZyme HRGMv2_3983_53 HRGMv2_3983_53_12 17028 17846 + CE1
Gene ID: HRGMv2_3983_53_5
Type: CAZyme
Location: 8226 - 9875 (+)
Gene ID: HRGMv2_3983_53_6
Type: CAZyme
Location: 9925 - 11145 (+)
Gene ID: HRGMv2_3983_53_7
Type: pfam
Location: 11268 - 11747 (-)
Gene ID: HRGMv2_3983_53_8
Type: TC
Location: 11802 - 13088 (-)
Gene ID: HRGMv2_3983_53_9
Type: peptidase
Location: 13273 - 14055 (-)
Gene ID: HRGMv2_3983_53_10
Type: TC
Location: 14075 - 16453 (-)
Gene ID: HRGMv2_3983_53_11
Type: pfam
Location: 16568 - 17002 (+)
Gene ID: HRGMv2_3983_53_12
Type: CAZyme
Location: 17028 - 17846 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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