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Cluster: HRGMv2_3983_CGC130

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3983_44 HRGMv2_3983_44_15 17117 20431 + 1.B.14.6.1
pfam HRGMv2_3983_44 HRGMv2_3983_44_16 20471 22258 + SusD_RagB | SusD-like_3
peptidase HRGMv2_3983_44 HRGMv2_3983_44_17 22331 23989 + M26.UPW
CAZyme HRGMv2_3983_44 HRGMv2_3983_44_18 24016 25005 + GH43_31
CAZyme HRGMv2_3983_44 HRGMv2_3983_44_19 25024 27057 + GH182
peptidase HRGMv2_3983_44 HRGMv2_3983_44_20 27174 28352 + C01.UPA
pfam HRGMv2_3983_44 HRGMv2_3983_44_21 28445 29146 - DUF4627
CAZyme HRGMv2_3983_44 HRGMv2_3983_44_22 29197 31131 - PL33_1
pfam HRGMv2_3983_44 HRGMv2_3983_44_23 31239 32330 - IMS | IMS_HHH | IMS_C
pfam HRGMv2_3983_44 HRGMv2_3983_44_24 32533 33963 + DUF4419
CAZyme HRGMv2_3983_44 HRGMv2_3983_44_25 34005 35405 - GH29
Gene ID: HRGMv2_3983_44_15
Type: TC
Location: 17117 - 20431 (+)
Gene ID: HRGMv2_3983_44_16
Type: pfam
Location: 20471 - 22258 (+)
Gene ID: HRGMv2_3983_44_17
Type: peptidase
Location: 22331 - 23989 (+)
Gene ID: HRGMv2_3983_44_18
Type: CAZyme
Location: 24016 - 25005 (+)
Gene ID: HRGMv2_3983_44_19
Type: CAZyme
Location: 25024 - 27057 (+)
Gene ID: HRGMv2_3983_44_20
Type: peptidase
Location: 27174 - 28352 (+)
Gene ID: HRGMv2_3983_44_21
Type: pfam
Location: 28445 - 29146 (-)
Gene ID: HRGMv2_3983_44_22
Type: CAZyme
Location: 29197 - 31131 (-)
Gene ID: HRGMv2_3983_44_23
Type: pfam
Location: 31239 - 32330 (-)
Gene ID: HRGMv2_3983_44_24
Type: pfam
Location: 32533 - 33963 (+)
Gene ID: HRGMv2_3983_44_25
Type: CAZyme
Location: 34005 - 35405 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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