Cluster: HRGMv2_3983_CGC125
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3983
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3983_40 | HRGMv2_3983_40_27 | 28864 | 29706 | + | GT5 |
| pfam | HRGMv2_3983_40 | HRGMv2_3983_40_28 | 29728 | 31431 | + | DUF4270 |
| CAZyme | HRGMv2_3983_40 | HRGMv2_3983_40_29 | 31592 | 33076 | - | GH57 |
| CAZyme | HRGMv2_3983_40 | HRGMv2_3983_40_30 | 33094 | 34362 | - | GT4 |
| CAZyme | HRGMv2_3983_40 | HRGMv2_3983_40_31 | 34380 | 36317 | - | GH133 |
| TC | HRGMv2_3983_40 | HRGMv2_3983_40_32 | 36531 | 37301 | + | 9.B.104.3.2 |
Gene ID: HRGMv2_3983_40_27
Type: CAZyme
Location: 28864 - 29706 (+)
Type: CAZyme
Location: 28864 - 29706 (+)
Gene ID: HRGMv2_3983_40_28
Type: pfam
Location: 29728 - 31431 (+)
Type: pfam
Location: 29728 - 31431 (+)
Gene ID: HRGMv2_3983_40_29
Type: CAZyme
Location: 31592 - 33076 (-)
Type: CAZyme
Location: 31592 - 33076 (-)
Gene ID: HRGMv2_3983_40_30
Type: CAZyme
Location: 33094 - 34362 (-)
Type: CAZyme
Location: 33094 - 34362 (-)
Gene ID: HRGMv2_3983_40_31
Type: CAZyme
Location: 34380 - 36317 (-)
Type: CAZyme
Location: 34380 - 36317 (-)
Gene ID: HRGMv2_3983_40_32
Type: TC
Location: 36531 - 37301 (+)
Type: TC
Location: 36531 - 37301 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp014750685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.