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Cluster: HRGMv2_3983_CGC120

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3983_34 HRGMv2_3983_34_35 48625 49965 + 1.A.26.1.2
pfam HRGMv2_3983_34 HRGMv2_3983_34_36 50051 51904 + DUF349 | DUF349 | DUF349 | DUF349 | DUF349
pfam HRGMv2_3983_34 HRGMv2_3983_34_37 52441 52800 + RsfS
TC HRGMv2_3983_34 HRGMv2_3983_34_38 52810 54945 + 3.A.16.1.1
pfam HRGMv2_3983_34 HRGMv2_3983_34_39 54981 55823 + CTP_transf_1
pfam HRGMv2_3983_34 HRGMv2_3983_34_40 55931 56698 - NigD_N | NigD_C
CAZyme HRGMv2_3983_34 HRGMv2_3983_34_41 56792 57928 - GT19
Gene ID: HRGMv2_3983_34_35
Type: TC
Location: 48625 - 49965 (+)
Gene ID: HRGMv2_3983_34_36
Type: pfam
Location: 50051 - 51904 (+)
Gene ID: HRGMv2_3983_34_37
Type: pfam
Location: 52441 - 52800 (+)
Gene ID: HRGMv2_3983_34_38
Type: TC
Location: 52810 - 54945 (+)
Gene ID: HRGMv2_3983_34_39
Type: pfam
Location: 54981 - 55823 (+)
Gene ID: HRGMv2_3983_34_40
Type: pfam
Location: 55931 - 56698 (-)
Gene ID: HRGMv2_3983_34_41
Type: CAZyme
Location: 56792 - 57928 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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