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Cluster: HRGMv2_3983_CGC118

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3983_33 HRGMv2_3983_33_21 22059 23237 + GT4
NULL(UNKNOWN) HRGMv2_3983_33 HRGMv2_3983_33_22 23241 24056 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3983_33 HRGMv2_3983_33_23 24065 24706 + Hexapep
TC HRGMv2_3983_33 HRGMv2_3983_33_24 24789 25382 + 9.B.18.1.3
NULL(UNKNOWN) HRGMv2_3983_33 HRGMv2_3983_33_25 25388 26476 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3983_33 HRGMv2_3983_33_26 26491 27687 + ATP-grasp_3 | CPSase_L_D2 | ATP-grasp_4 | LAL_C2
CAZyme HRGMv2_3983_33 HRGMv2_3983_33_27 27684 28898 + GT4
Gene ID: HRGMv2_3983_33_21
Type: CAZyme
Location: 22059 - 23237 (+)
Gene ID: HRGMv2_3983_33_22
Type:
Location: 23241 - 24056 (+)
Gene ID: HRGMv2_3983_33_23
Type: pfam
Location: 24065 - 24706 (+)
Gene ID: HRGMv2_3983_33_24
Type: TC
Location: 24789 - 25382 (+)
Gene ID: HRGMv2_3983_33_25
Type:
Location: 25388 - 26476 (+)
Gene ID: HRGMv2_3983_33_26
Type: pfam
Location: 26491 - 27687 (+)
Gene ID: HRGMv2_3983_33_27
Type: CAZyme
Location: 27684 - 28898 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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