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Cluster: HRGMv2_3983_CGC112

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3983_28 HRGMv2_3983_28_1 248 1414 + CE9
CAZyme HRGMv2_3983_28 HRGMv2_3983_28_2 1436 2608 + CE9
pfam HRGMv2_3983_28 HRGMv2_3983_28_3 2773 3132 - Thioredoxin | Thioredoxin_2 | TraF
TC HRGMv2_3983_28 HRGMv2_3983_28_4 3374 4639 + 2.A.6.1.5
TC HRGMv2_3983_28 HRGMv2_3983_28_5 4662 5756 + 2.A.6.1.5
TC HRGMv2_3983_28 HRGMv2_3983_28_6 5774 8899 + 2.A.6.1.17
STP HRGMv2_3983_28 HRGMv2_3983_28_7 8988 10319 - HATPase_c | HisKA
TF HRGMv2_3983_28 HRGMv2_3983_28_8 10343 11017 - Trans_reg_C
CAZyme HRGMv2_3983_28 HRGMv2_3983_28_9 11133 13142 + GH97
TC HRGMv2_3983_28 HRGMv2_3983_28_10 13419 15083 - 4.C.1.1.4
TC HRGMv2_3983_28 HRGMv2_3983_28_11 15365 16831 - 2.A.36.6.11
TC HRGMv2_3983_28 HRGMv2_3983_28_12 16998 18182 + 2.A.40.1.4
Gene ID: HRGMv2_3983_28_1
Type: CAZyme
Location: 248 - 1414 (+)
Gene ID: HRGMv2_3983_28_2
Type: CAZyme
Location: 1436 - 2608 (+)
Gene ID: HRGMv2_3983_28_3
Type: pfam
Location: 2773 - 3132 (-)
Gene ID: HRGMv2_3983_28_4
Type: TC
Location: 3374 - 4639 (+)
Gene ID: HRGMv2_3983_28_5
Type: TC
Location: 4662 - 5756 (+)
Gene ID: HRGMv2_3983_28_6
Type: TC
Location: 5774 - 8899 (+)
Gene ID: HRGMv2_3983_28_7
Type: STP
Location: 8988 - 10319 (-)
Gene ID: HRGMv2_3983_28_8
Type: TF
Location: 10343 - 11017 (-)
Gene ID: HRGMv2_3983_28_9
Type: CAZyme
Location: 11133 - 13142 (+)
Gene ID: HRGMv2_3983_28_10
Type: TC
Location: 13419 - 15083 (-)
Gene ID: HRGMv2_3983_28_11
Type: TC
Location: 15365 - 16831 (-)
Gene ID: HRGMv2_3983_28_12
Type: TC
Location: 16998 - 18182 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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