Cluster: HRGMv2_3983_CGC111
🧬 Cluster Details
- Gene Count: 23
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_3983
- CGC Family ID: CGCFAM_00985
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3983_27 | HRGMv2_3983_27_24 | 26550 | 28169 | - | 3.A.1.121.4 |
| TC | HRGMv2_3983_27 | HRGMv2_3983_27_25 | 28510 | 29094 | + | 3.A.8.1.1 |
| pfam | HRGMv2_3983_27 | HRGMv2_3983_27_26 | 29121 | 30308 | + | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| TC | HRGMv2_3983_27 | HRGMv2_3983_27_27 | 30375 | 32087 | - | 8.A.46.1.1 |
| TC | HRGMv2_3983_27 | HRGMv2_3983_27_28 | 32103 | 34850 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_3983_27 | HRGMv2_3983_27_29 | 35046 | 37118 | - | GH20 |
| CAZyme | HRGMv2_3983_27 | HRGMv2_3983_27_30 | 37118 | 39442 | - | GH20 |
| CAZyme | HRGMv2_3983_27 | HRGMv2_3983_27_31 | 39481 | 42072 | - | GH2 |
| CAZyme | HRGMv2_3983_27 | HRGMv2_3983_27_32 | 42524 | 45727 | - | CE20 | CE3 |
| sulfatase | HRGMv2_3983_27 | HRGMv2_3983_27_33 | 45724 | 46389 | - | S1_16 |
| CAZyme | HRGMv2_3983_27 | HRGMv2_3983_27_34 | 46405 | 48420 | - | GH20 |
| CAZyme | HRGMv2_3983_27 | HRGMv2_3983_27_35 | 48445 | 50127 | - | CBM93 | GH33 |
| TC | HRGMv2_3983_27 | HRGMv2_3983_27_36 | 50262 | 51899 | - | 8.A.46.1.4 |
| TC | HRGMv2_3983_27 | HRGMv2_3983_27_37 | 51926 | 55219 | - | 1.B.14.6.1 |
| pfam | HRGMv2_3983_27 | HRGMv2_3983_27_38 | 56316 | 57560 | - | Abhydrolase_7 |
| pfam | HRGMv2_3983_27 | HRGMv2_3983_27_39 | 57670 | 59712 | - | Mfa_like_1 |
| TC | HRGMv2_3983_27 | HRGMv2_3983_27_40 | 59761 | 61311 | - | 8.A.46.1.4 |
| peptidase | HRGMv2_3983_27 | HRGMv2_3983_27_41 | 61334 | 64600 | - | I39.UPW |
| CAZyme | HRGMv2_3983_27 | HRGMv2_3983_27_42 | 64611 | 65882 | - | GH33 |
| CAZyme | HRGMv2_3983_27 | HRGMv2_3983_27_43 | 65893 | 67056 | - | GH33 |
| pfam | HRGMv2_3983_27 | HRGMv2_3983_27_44 | 67094 | 68278 | - | GlcNAc_2-epim |
| pfam | HRGMv2_3983_27 | HRGMv2_3983_27_45 | 68289 | 69206 | - | DHDPS |
| TC | HRGMv2_3983_27 | HRGMv2_3983_27_46 | 69240 | 70481 | - | 2.A.1.14.25 |
Gene ID: HRGMv2_3983_27_24
Type: TC
Location: 26550 - 28169 (-)
Type: TC
Location: 26550 - 28169 (-)
Gene ID: HRGMv2_3983_27_25
Type: TC
Location: 28510 - 29094 (+)
Type: TC
Location: 28510 - 29094 (+)
Gene ID: HRGMv2_3983_27_26
Type: pfam
Location: 29121 - 30308 (+)
Type: pfam
Location: 29121 - 30308 (+)
Gene ID: HRGMv2_3983_27_27
Type: TC
Location: 30375 - 32087 (-)
Type: TC
Location: 30375 - 32087 (-)
Gene ID: HRGMv2_3983_27_28
Type: TC
Location: 32103 - 34850 (-)
Type: TC
Location: 32103 - 34850 (-)
Gene ID: HRGMv2_3983_27_29
Type: CAZyme
Location: 35046 - 37118 (-)
Type: CAZyme
Location: 35046 - 37118 (-)
Gene ID: HRGMv2_3983_27_30
Type: CAZyme
Location: 37118 - 39442 (-)
Type: CAZyme
Location: 37118 - 39442 (-)
Gene ID: HRGMv2_3983_27_31
Type: CAZyme
Location: 39481 - 42072 (-)
Type: CAZyme
Location: 39481 - 42072 (-)
Gene ID: HRGMv2_3983_27_32
Type: CAZyme
Location: 42524 - 45727 (-)
Type: CAZyme
Location: 42524 - 45727 (-)
Gene ID: HRGMv2_3983_27_33
Type: sulfatase
Location: 45724 - 46389 (-)
Type: sulfatase
Location: 45724 - 46389 (-)
Gene ID: HRGMv2_3983_27_34
Type: CAZyme
Location: 46405 - 48420 (-)
Type: CAZyme
Location: 46405 - 48420 (-)
Gene ID: HRGMv2_3983_27_35
Type: CAZyme
Location: 48445 - 50127 (-)
Type: CAZyme
Location: 48445 - 50127 (-)
Gene ID: HRGMv2_3983_27_36
Type: TC
Location: 50262 - 51899 (-)
Type: TC
Location: 50262 - 51899 (-)
Gene ID: HRGMv2_3983_27_37
Type: TC
Location: 51926 - 55219 (-)
Type: TC
Location: 51926 - 55219 (-)
Gene ID: HRGMv2_3983_27_38
Type: pfam
Location: 56316 - 57560 (-)
Type: pfam
Location: 56316 - 57560 (-)
Gene ID: HRGMv2_3983_27_39
Type: pfam
Location: 57670 - 59712 (-)
Type: pfam
Location: 57670 - 59712 (-)
Gene ID: HRGMv2_3983_27_40
Type: TC
Location: 59761 - 61311 (-)
Type: TC
Location: 59761 - 61311 (-)
Gene ID: HRGMv2_3983_27_41
Type: peptidase
Location: 61334 - 64600 (-)
Type: peptidase
Location: 61334 - 64600 (-)
Gene ID: HRGMv2_3983_27_42
Type: CAZyme
Location: 64611 - 65882 (-)
Type: CAZyme
Location: 64611 - 65882 (-)
Gene ID: HRGMv2_3983_27_43
Type: CAZyme
Location: 65893 - 67056 (-)
Type: CAZyme
Location: 65893 - 67056 (-)
Gene ID: HRGMv2_3983_27_44
Type: pfam
Location: 67094 - 68278 (-)
Type: pfam
Location: 67094 - 68278 (-)
Gene ID: HRGMv2_3983_27_45
Type: pfam
Location: 68289 - 69206 (-)
Type: pfam
Location: 68289 - 69206 (-)
Gene ID: HRGMv2_3983_27_46
Type: TC
Location: 69240 - 70481 (-)
Type: TC
Location: 69240 - 70481 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp014750685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.