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Cluster: HRGMv2_3983_CGC105

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_15 20601 21734 - GH18
TC HRGMv2_3983_23 HRGMv2_3983_23_16 21763 23313 - 8.A.46.2.1
TC HRGMv2_3983_23 HRGMv2_3983_23_17 23330 26074 - 1.B.14.6.13
pfam HRGMv2_3983_23 HRGMv2_3983_23_18 26359 27543 - BT_3987-like_N | Laminin_G_3
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_19 27564 28661 - GH18
TC HRGMv2_3983_23 HRGMv2_3983_23_20 28708 30345 - 8.A.46.2.2
TC HRGMv2_3983_23 HRGMv2_3983_23_21 30364 33666 - 1.B.14.6.13
pfam HRGMv2_3983_23 HRGMv2_3983_23_22 34043 35278 + Phage_integrase | Phage_int_SAM_5 | Arm-DNA-bind_5
NULL(UNKNOWN) HRGMv2_3983_23 HRGMv2_3983_23_23 35288 35392 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3983_23 HRGMv2_3983_23_24 35566 38331 + 1.B.14.6.13
TC HRGMv2_3983_23 HRGMv2_3983_23_25 38362 39894 + 8.A.46.2.1
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_26 39918 40940 + GH18
pfam HRGMv2_3983_23 HRGMv2_3983_23_27 40957 42123 + BT_3987-like_N | Laminin_G_3
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_28 42294 44495 + GH163
pfam HRGMv2_3983_23 HRGMv2_3983_23_29 44594 45919 + MFS_1 | MFS_1
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_30 45941 46909 + GH130_2
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_31 46917 49181 + GH92
pfam HRGMv2_3983_23 HRGMv2_3983_23_32 49484 50371 + AP_endonuc_2
pfam HRGMv2_3983_23 HRGMv2_3983_23_33 50683 52155 + DUF4957 | DUF4992 | DUF5123
TC HRGMv2_3983_23 HRGMv2_3983_23_34 52186 55494 + 1.B.14.6.2
pfam HRGMv2_3983_23 HRGMv2_3983_23_35 55510 57729 + SusD_RagB | SusD-like_3
TC HRGMv2_3983_23 HRGMv2_3983_23_36 58028 61468 + 1.B.14.6.1
pfam HRGMv2_3983_23 HRGMv2_3983_23_37 61492 63459 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_38 63781 65520 + PL1_2
pfam HRGMv2_3983_23 HRGMv2_3983_23_39 65588 66256 + DUF3826
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_40 66475 67404 + GH43_18
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_41 67426 70746 + GH142 | GH143
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_42 70926 73745 + CBM67 | GH78
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_43 73921 75255 + GH28
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_44 75283 77247 + CE19
pfam HRGMv2_3983_23 HRGMv2_3983_23_45 77433 78224 + Patatin
sulfatase HRGMv2_3983_23 HRGMv2_3983_23_46 78199 79086 - S1_6
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_47 79287 83153 - CBM67 | GH33 | GH78
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_48 83218 84687 - GH140
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_49 84740 85942 - GH105
CAZyme HRGMv2_3983_23 HRGMv2_3983_23_50 85955 88429 - GH95
Gene ID: HRGMv2_3983_23_15
Type: CAZyme
Location: 20601 - 21734 (-)
Gene ID: HRGMv2_3983_23_16
Type: TC
Location: 21763 - 23313 (-)
Gene ID: HRGMv2_3983_23_17
Type: TC
Location: 23330 - 26074 (-)
Gene ID: HRGMv2_3983_23_18
Type: pfam
Location: 26359 - 27543 (-)
Gene ID: HRGMv2_3983_23_19
Type: CAZyme
Location: 27564 - 28661 (-)
Gene ID: HRGMv2_3983_23_20
Type: TC
Location: 28708 - 30345 (-)
Gene ID: HRGMv2_3983_23_21
Type: TC
Location: 30364 - 33666 (-)
Gene ID: HRGMv2_3983_23_22
Type: pfam
Location: 34043 - 35278 (+)
Gene ID: HRGMv2_3983_23_23
Type:
Location: 35288 - 35392 (+)
Gene ID: HRGMv2_3983_23_24
Type: TC
Location: 35566 - 38331 (+)
Gene ID: HRGMv2_3983_23_25
Type: TC
Location: 38362 - 39894 (+)
Gene ID: HRGMv2_3983_23_26
Type: CAZyme
Location: 39918 - 40940 (+)
Gene ID: HRGMv2_3983_23_27
Type: pfam
Location: 40957 - 42123 (+)
Gene ID: HRGMv2_3983_23_28
Type: CAZyme
Location: 42294 - 44495 (+)
Gene ID: HRGMv2_3983_23_29
Type: pfam
Location: 44594 - 45919 (+)
Gene ID: HRGMv2_3983_23_30
Type: CAZyme
Location: 45941 - 46909 (+)
Gene ID: HRGMv2_3983_23_31
Type: CAZyme
Location: 46917 - 49181 (+)
Gene ID: HRGMv2_3983_23_32
Type: pfam
Location: 49484 - 50371 (+)
Gene ID: HRGMv2_3983_23_33
Type: pfam
Location: 50683 - 52155 (+)
Gene ID: HRGMv2_3983_23_34
Type: TC
Location: 52186 - 55494 (+)
Gene ID: HRGMv2_3983_23_35
Type: pfam
Location: 55510 - 57729 (+)
Gene ID: HRGMv2_3983_23_36
Type: TC
Location: 58028 - 61468 (+)
Gene ID: HRGMv2_3983_23_37
Type: pfam
Location: 61492 - 63459 (+)
Gene ID: HRGMv2_3983_23_38
Type: CAZyme
Location: 63781 - 65520 (+)
Gene ID: HRGMv2_3983_23_39
Type: pfam
Location: 65588 - 66256 (+)
Gene ID: HRGMv2_3983_23_40
Type: CAZyme
Location: 66475 - 67404 (+)
Gene ID: HRGMv2_3983_23_41
Type: CAZyme
Location: 67426 - 70746 (+)
Gene ID: HRGMv2_3983_23_42
Type: CAZyme
Location: 70926 - 73745 (+)
Gene ID: HRGMv2_3983_23_43
Type: CAZyme
Location: 73921 - 75255 (+)
Gene ID: HRGMv2_3983_23_44
Type: CAZyme
Location: 75283 - 77247 (+)
Gene ID: HRGMv2_3983_23_45
Type: pfam
Location: 77433 - 78224 (+)
Gene ID: HRGMv2_3983_23_46
Type: sulfatase
Location: 78199 - 79086 (-)
Gene ID: HRGMv2_3983_23_47
Type: CAZyme
Location: 79287 - 83153 (-)
Gene ID: HRGMv2_3983_23_48
Type: CAZyme
Location: 83218 - 84687 (-)
Gene ID: HRGMv2_3983_23_49
Type: CAZyme
Location: 84740 - 85942 (-)
Gene ID: HRGMv2_3983_23_50
Type: CAZyme
Location: 85955 - 88429 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3983_23_22 vegan > omnivore 1.27960 0.00229
HRGMv2_3983_23_32 vegan > omnivore 1.11240 0.00229

🧭 Explore Read Mapping of CGC

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