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Cluster: HRGMv2_3983_CGC100

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3983_21 HRGMv2_3983_21_57 74524 76662 + PL12_2
NULL(UNKNOWN) HRGMv2_3983_21 HRGMv2_3983_21_58 76699 76821 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3983_21 HRGMv2_3983_21_59 76953 79031 + PL12_2
pfam HRGMv2_3983_21 HRGMv2_3983_21_60 79064 81373 + SGBP_BT4661-like
TC HRGMv2_3983_21 HRGMv2_3983_21_61 81389 84538 + 1.B.14.6.1
sulfatase HRGMv2_3983_21 HRGMv2_3983_21_62 84553 86262 + S1_27
CAZyme HRGMv2_3983_21 HRGMv2_3983_21_63 86449 87735 + GH88
CAZyme HRGMv2_3983_21 HRGMv2_3983_21_64 87764 89764 + PL12_2
Gene ID: HRGMv2_3983_21_57
Type: CAZyme
Location: 74524 - 76662 (+)
Gene ID: HRGMv2_3983_21_58
Type:
Location: 76699 - 76821 (+)
Gene ID: HRGMv2_3983_21_59
Type: CAZyme
Location: 76953 - 79031 (+)
Gene ID: HRGMv2_3983_21_60
Type: pfam
Location: 79064 - 81373 (+)
Gene ID: HRGMv2_3983_21_61
Type: TC
Location: 81389 - 84538 (+)
Gene ID: HRGMv2_3983_21_62
Type: sulfatase
Location: 84553 - 86262 (+)
Gene ID: HRGMv2_3983_21_63
Type: CAZyme
Location: 86449 - 87735 (+)
Gene ID: HRGMv2_3983_21_64
Type: CAZyme
Location: 87764 - 89764 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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