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Cluster: HRGMv2_3979_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3979_34 HRGMv2_3979_34_128 130485 132875 + 1.B.14.6.7
STP HRGMv2_3979_34 HRGMv2_3979_34_129 133016 133420 + Glyoxalase
pfam HRGMv2_3979_34 HRGMv2_3979_34_130 133408 134424 + 3keto-disac_hyd
CAZyme HRGMv2_3979_34 HRGMv2_3979_34_131 134452 137370 + CBM67 | GH78
pfam HRGMv2_3979_34 HRGMv2_3979_34_132 137464 137808 - Asp_decarbox
pfam HRGMv2_3979_34 HRGMv2_3979_34_133 137820 138665 - Pantoate_ligase
CAZyme HRGMv2_3979_34 HRGMv2_3979_34_134 138916 139758 + GT5
Gene ID: HRGMv2_3979_34_128
Type: TC
Location: 130485 - 132875 (+)
Gene ID: HRGMv2_3979_34_129
Type: STP
Location: 133016 - 133420 (+)
Gene ID: HRGMv2_3979_34_130
Type: pfam
Location: 133408 - 134424 (+)
Gene ID: HRGMv2_3979_34_131
Type: CAZyme
Location: 134452 - 137370 (+)
Gene ID: HRGMv2_3979_34_132
Type: pfam
Location: 137464 - 137808 (-)
Gene ID: HRGMv2_3979_34_133
Type: pfam
Location: 137820 - 138665 (-)
Gene ID: HRGMv2_3979_34_134
Type: CAZyme
Location: 138916 - 139758 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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