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Cluster: HRGMv2_3979_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3979_4 HRGMv2_3979_4_45 60328 61563 - 2.A.1.35.1
NULL(UNKNOWN) HRGMv2_3979_4 HRGMv2_3979_4_46 61563 61697 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3979_4 HRGMv2_3979_4_47 62295 63569 - 3.D.5.1.1
TC HRGMv2_3979_4 HRGMv2_3979_4_48 63597 64226 - 3.D.5.1.1
TC HRGMv2_3979_4 HRGMv2_3979_4_49 64228 64857 - 3.D.5.1.1
TC HRGMv2_3979_4 HRGMv2_3979_4_50 64881 65615 - 3.D.5.1.1
TC HRGMv2_3979_4 HRGMv2_3979_4_51 65631 66806 - 3.D.5.1.1
pfam HRGMv2_3979_4 HRGMv2_3979_4_52 66824 68152 - NQRA_N | NQRA_SLBB | NQRA_2nd
pfam HRGMv2_3979_4 HRGMv2_3979_4_53 68369 72805 + TamB
CAZyme HRGMv2_3979_4 HRGMv2_3979_4_54 73954 76521 + GH31_15
Gene ID: HRGMv2_3979_4_45
Type: TC
Location: 60328 - 61563 (-)
Gene ID: HRGMv2_3979_4_46
Type:
Location: 61563 - 61697 (-)
Gene ID: HRGMv2_3979_4_47
Type: TC
Location: 62295 - 63569 (-)
Gene ID: HRGMv2_3979_4_48
Type: TC
Location: 63597 - 64226 (-)
Gene ID: HRGMv2_3979_4_49
Type: TC
Location: 64228 - 64857 (-)
Gene ID: HRGMv2_3979_4_50
Type: TC
Location: 64881 - 65615 (-)
Gene ID: HRGMv2_3979_4_51
Type: TC
Location: 65631 - 66806 (-)
Gene ID: HRGMv2_3979_4_52
Type: pfam
Location: 66824 - 68152 (-)
Gene ID: HRGMv2_3979_4_53
Type: pfam
Location: 68369 - 72805 (+)
Gene ID: HRGMv2_3979_4_54
Type: CAZyme
Location: 73954 - 76521 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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