Cluster: HRGMv2_3979_CGC39
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_3979
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3979_34 | HRGMv2_3979_34_37 | 34323 | 35756 | + | 2.A.66.2.6 |
| CAZyme | HRGMv2_3979_34 | HRGMv2_3979_34_38 | 35758 | 36945 | + | GT4 |
| pfam | HRGMv2_3979_34 | HRGMv2_3979_34_39 | 36929 | 37558 | + | Hexapep | Hexapep_2 |
| pfam | HRGMv2_3979_34 | HRGMv2_3979_34_40 | 37581 | 38723 | + | Glyco_tran_WbsX |
| CAZyme | HRGMv2_3979_34 | HRGMv2_3979_34_41 | 38759 | 39775 | + | GT32 |
| NULL(UNKNOWN) | HRGMv2_3979_34 | HRGMv2_3979_34_42 | 39781 | 40944 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3979_34 | HRGMv2_3979_34_43 | 40946 | 41941 | + | Acyl_transf_3 |
| CAZyme | HRGMv2_3979_34 | HRGMv2_3979_34_44 | 41960 | 42805 | + | GT2 |
| CAZyme | HRGMv2_3979_34 | HRGMv2_3979_34_45 | 42821 | 43789 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3979_34 | HRGMv2_3979_34_46 | 43789 | 45105 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3979_34 | HRGMv2_3979_34_47 | 45102 | 46118 | + | Acyl_transf_3 |
| CAZyme | HRGMv2_3979_34 | HRGMv2_3979_34_48 | 46115 | 47353 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_3979_34 | HRGMv2_3979_34_49 | 47354 | 48457 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3979_34 | HRGMv2_3979_34_50 | 48454 | 49533 | + | GT4 |
| CAZyme | HRGMv2_3979_34 | HRGMv2_3979_34_51 | 49553 | 50629 | + | GT4 |
Gene ID: HRGMv2_3979_34_37
Type: TC
Location: 34323 - 35756 (+)
Type: TC
Location: 34323 - 35756 (+)
Gene ID: HRGMv2_3979_34_38
Type: CAZyme
Location: 35758 - 36945 (+)
Type: CAZyme
Location: 35758 - 36945 (+)
Gene ID: HRGMv2_3979_34_39
Type: pfam
Location: 36929 - 37558 (+)
Type: pfam
Location: 36929 - 37558 (+)
Gene ID: HRGMv2_3979_34_40
Type: pfam
Location: 37581 - 38723 (+)
Type: pfam
Location: 37581 - 38723 (+)
Gene ID: HRGMv2_3979_34_41
Type: CAZyme
Location: 38759 - 39775 (+)
Type: CAZyme
Location: 38759 - 39775 (+)
Gene ID: HRGMv2_3979_34_42
Type:
Location: 39781 - 40944 (+)
Type:
Location: 39781 - 40944 (+)
Gene ID: HRGMv2_3979_34_43
Type: pfam
Location: 40946 - 41941 (+)
Type: pfam
Location: 40946 - 41941 (+)
Gene ID: HRGMv2_3979_34_44
Type: CAZyme
Location: 41960 - 42805 (+)
Type: CAZyme
Location: 41960 - 42805 (+)
Gene ID: HRGMv2_3979_34_45
Type: CAZyme
Location: 42821 - 43789 (+)
Type: CAZyme
Location: 42821 - 43789 (+)
Gene ID: HRGMv2_3979_34_46
Type:
Location: 43789 - 45105 (+)
Type:
Location: 43789 - 45105 (+)
Gene ID: HRGMv2_3979_34_47
Type: pfam
Location: 45102 - 46118 (+)
Type: pfam
Location: 45102 - 46118 (+)
Gene ID: HRGMv2_3979_34_48
Type: CAZyme
Location: 46115 - 47353 (+)
Type: CAZyme
Location: 46115 - 47353 (+)
Gene ID: HRGMv2_3979_34_49
Type:
Location: 47354 - 48457 (+)
Type:
Location: 47354 - 48457 (+)
Gene ID: HRGMv2_3979_34_50
Type: CAZyme
Location: 48454 - 49533 (+)
Type: CAZyme
Location: 48454 - 49533 (+)
Gene ID: HRGMv2_3979_34_51
Type: CAZyme
Location: 49553 - 50629 (+)
Type: CAZyme
Location: 49553 - 50629 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
UBA4372
Species
UBA4372 sp019420585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.