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Cluster: HRGMv2_3979_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3979_24 HRGMv2_3979_24_9 9579 10952 - 2.A.6.2.46
TC HRGMv2_3979_24 HRGMv2_3979_24_10 10979 14110 - 2.A.6.2.22
TC HRGMv2_3979_24 HRGMv2_3979_24_11 14114 15247 - 8.A.1.6.3
TC HRGMv2_3979_24 HRGMv2_3979_24_12 15381 16442 + 9.B.33.1.1
TF HRGMv2_3979_24 HRGMv2_3979_24_13 16442 17146 + LytTR
CAZyme HRGMv2_3979_24 HRGMv2_3979_24_14 17161 18936 - GH173
pfam HRGMv2_3979_24 HRGMv2_3979_24_15 19239 24398 - Laminin_G_3
CAZyme HRGMv2_3979_24 HRGMv2_3979_24_16 24839 27019 + GH92
CAZyme HRGMv2_3979_24 HRGMv2_3979_24_17 27085 28503 + GH125
Gene ID: HRGMv2_3979_24_9
Type: TC
Location: 9579 - 10952 (-)
Gene ID: HRGMv2_3979_24_10
Type: TC
Location: 10979 - 14110 (-)
Gene ID: HRGMv2_3979_24_11
Type: TC
Location: 14114 - 15247 (-)
Gene ID: HRGMv2_3979_24_12
Type: TC
Location: 15381 - 16442 (+)
Gene ID: HRGMv2_3979_24_13
Type: TF
Location: 16442 - 17146 (+)
Gene ID: HRGMv2_3979_24_14
Type: CAZyme
Location: 17161 - 18936 (-)
Gene ID: HRGMv2_3979_24_15
Type: pfam
Location: 19239 - 24398 (-)
Gene ID: HRGMv2_3979_24_16
Type: CAZyme
Location: 24839 - 27019 (+)
Gene ID: HRGMv2_3979_24_17
Type: CAZyme
Location: 27085 - 28503 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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