dbCAN HGM

Cluster: HRGMv2_3979_CGC31

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_3979_20	HRGMv2_3979_20_197	240463	242073	+	9.B.174.1.1
pfam	HRGMv2_3979_20	HRGMv2_3979_20_198	242070	242501	+	YbeY
STP	HRGMv2_3979_20	HRGMv2_3979_20_199	242506	243540	+	AAA
TC	HRGMv2_3979_20	HRGMv2_3979_20_200	243562	244791	+	9.B.156.3.1
pfam	HRGMv2_3979_20	HRGMv2_3979_20_201	244800	246251	+	Polysacc_synt \| Polysacc_synt_3
CAZyme	HRGMv2_3979_20	HRGMv2_3979_20_202	246299	247666	+	GH109
pfam	HRGMv2_3979_20	HRGMv2_3979_20_203	247776	248711	-	Acyl_transf_3
pfam	HRGMv2_3979_20	HRGMv2_3979_20_204	248692	248955	-	FeoB_associated
TC	HRGMv2_3979_20	HRGMv2_3979_20_205	248952	251333	-	9.A.8.1.6
peptidase	HRGMv2_3979_20	HRGMv2_3979_20_206	251527	252798	-	M16.UPB
CAZyme	HRGMv2_3979_20	HRGMv2_3979_20_207	252896	254416	+	GH29

Gene ID: HRGMv2_3979_20_197
Type: TC
Location: 240463 - 242073 (+)

Gene ID: HRGMv2_3979_20_198
Type: pfam
Location: 242070 - 242501 (+)

Gene ID: HRGMv2_3979_20_199
Type: STP
Location: 242506 - 243540 (+)

Gene ID: HRGMv2_3979_20_200
Type: TC
Location: 243562 - 244791 (+)

Gene ID: HRGMv2_3979_20_201
Type: pfam
Location: 244800 - 246251 (+)

Gene ID: HRGMv2_3979_20_202
Type: CAZyme
Location: 246299 - 247666 (+)

Gene ID: HRGMv2_3979_20_203
Type: pfam
Location: 247776 - 248711 (-)

Gene ID: HRGMv2_3979_20_204
Type: pfam
Location: 248692 - 248955 (-)

Gene ID: HRGMv2_3979_20_205
Type: TC
Location: 248952 - 251333 (-)

Gene ID: HRGMv2_3979_20_206
Type: peptidase
Location: 251527 - 252798 (-)

Gene ID: HRGMv2_3979_20_207
Type: CAZyme
Location: 252896 - 254416 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.