Cluster: HRGMv2_3979_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3979
- CGC Family ID: CGCFAM_05092
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3979_2 | HRGMv2_3979_2_25 | 24665 | 26164 | + | CE20 |
| CAZyme | HRGMv2_3979_2 | HRGMv2_3979_2_26 | 26497 | 27663 | - | CE9 |
| pfam | HRGMv2_3979_2 | HRGMv2_3979_2_27 | 27700 | 29085 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | HRGMv2_3979_2 | HRGMv2_3979_2_28 | 29117 | 32707 | - | CBM62 |
| TC | HRGMv2_3979_2 | HRGMv2_3979_2_29 | 32885 | 34150 | + | 9.B.10.1.1 |
| CAZyme | HRGMv2_3979_2 | HRGMv2_3979_2_30 | 34683 | 37331 | - | CBM67 | GH78 |
Gene ID: HRGMv2_3979_2_25
Type: CAZyme
Location: 24665 - 26164 (+)
Type: CAZyme
Location: 24665 - 26164 (+)
Gene ID: HRGMv2_3979_2_26
Type: CAZyme
Location: 26497 - 27663 (-)
Type: CAZyme
Location: 26497 - 27663 (-)
Gene ID: HRGMv2_3979_2_27
Type: pfam
Location: 27700 - 29085 (-)
Type: pfam
Location: 27700 - 29085 (-)
Gene ID: HRGMv2_3979_2_28
Type: CAZyme
Location: 29117 - 32707 (-)
Type: CAZyme
Location: 29117 - 32707 (-)
Gene ID: HRGMv2_3979_2_29
Type: TC
Location: 32885 - 34150 (+)
Type: TC
Location: 32885 - 34150 (+)
Gene ID: HRGMv2_3979_2_30
Type: CAZyme
Location: 34683 - 37331 (-)
Type: CAZyme
Location: 34683 - 37331 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
UBA4372
Species
UBA4372 sp019420585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.