dbCAN Logo

Cluster: HRGMv2_3979_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3979_12 HRGMv2_3979_12_50 47417 48772 - GH29
NULL(UNKNOWN) HRGMv2_3979_12 HRGMv2_3979_12_51 49116 51392 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3979_12 HRGMv2_3979_12_52 51417 54827 - 1.B.14.6.2
NULL(UNKNOWN) HRGMv2_3979_12 HRGMv2_3979_12_53 54858 56795 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3979_12 HRGMv2_3979_12_54 56844 58727 - SusD_RagB | SusD-like_3
TC HRGMv2_3979_12 HRGMv2_3979_12_55 58740 62219 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_3979_12 HRGMv2_3979_12_56 62232 65306 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_3979_12 HRGMv2_3979_12_57 65546 67567 - TPR_1
CAZyme HRGMv2_3979_12 HRGMv2_3979_12_58 67564 70080 - GT51
Gene ID: HRGMv2_3979_12_50
Type: CAZyme
Location: 47417 - 48772 (-)
Gene ID: HRGMv2_3979_12_51
Type:
Location: 49116 - 51392 (-)
Gene ID: HRGMv2_3979_12_52
Type: TC
Location: 51417 - 54827 (-)
Gene ID: HRGMv2_3979_12_53
Type:
Location: 54858 - 56795 (-)
Gene ID: HRGMv2_3979_12_54
Type: pfam
Location: 56844 - 58727 (-)
Gene ID: HRGMv2_3979_12_55
Type: TC
Location: 58740 - 62219 (-)
Gene ID: HRGMv2_3979_12_56
Type:
Location: 62232 - 65306 (-)
Gene ID: HRGMv2_3979_12_57
Type: STP
Location: 65546 - 67567 (-)
Gene ID: HRGMv2_3979_12_58
Type: CAZyme
Location: 67564 - 70080 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List