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Cluster: HRGMv2_3979_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3979_11 HRGMv2_3979_11_87 94535 95986 + 2.A.1.4.11
pfam HRGMv2_3979_11 HRGMv2_3979_11_88 95970 96800 + Hydrolase | PGP_phosphatase | Hydrolase_like | Hydrolase_6 | HAD_2
pfam HRGMv2_3979_11 HRGMv2_3979_11_89 96830 97252 + TonB_C
CAZyme HRGMv2_3979_11 HRGMv2_3979_11_90 98715 100661 + GH133
CAZyme HRGMv2_3979_11 HRGMv2_3979_11_91 100685 101992 + GT4
CAZyme HRGMv2_3979_11 HRGMv2_3979_11_92 102034 103536 + GH57
pfam HRGMv2_3979_11 HRGMv2_3979_11_93 103784 105709 - CN_hydrolase | NAD_synthase
STP HRGMv2_3979_11 HRGMv2_3979_11_94 105728 107779 - HATPase_c
TC HRGMv2_3979_11 HRGMv2_3979_11_95 107886 110441 - 3.A.9.1.2
Gene ID: HRGMv2_3979_11_87
Type: TC
Location: 94535 - 95986 (+)
Gene ID: HRGMv2_3979_11_88
Type: pfam
Location: 95970 - 96800 (+)
Gene ID: HRGMv2_3979_11_89
Type: pfam
Location: 96830 - 97252 (+)
Gene ID: HRGMv2_3979_11_90
Type: CAZyme
Location: 98715 - 100661 (+)
Gene ID: HRGMv2_3979_11_91
Type: CAZyme
Location: 100685 - 101992 (+)
Gene ID: HRGMv2_3979_11_92
Type: CAZyme
Location: 102034 - 103536 (+)
Gene ID: HRGMv2_3979_11_93
Type: pfam
Location: 103784 - 105709 (-)
Gene ID: HRGMv2_3979_11_94
Type: STP
Location: 105728 - 107779 (-)
Gene ID: HRGMv2_3979_11_95
Type: TC
Location: 107886 - 110441 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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