Cluster: HRGMv2_3979_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_3979
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3979_1 | HRGMv2_3979_1_40 | 52450 | 53451 | + | GT2 |
| CAZyme | HRGMv2_3979_1 | HRGMv2_3979_1_41 | 53490 | 54452 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3979_1 | HRGMv2_3979_1_42 | 54580 | 54981 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3979_1 | HRGMv2_3979_1_43 | 54971 | 55483 | + | DDE_Tnp_1 | DDE_Tnp_1_3 |
| CAZyme | HRGMv2_3979_1 | HRGMv2_3979_1_44 | 55508 | 56449 | + | GT101 |
| CAZyme | HRGMv2_3979_1 | HRGMv2_3979_1_45 | 56461 | 57432 | + | GT2 |
| CAZyme | HRGMv2_3979_1 | HRGMv2_3979_1_46 | 57432 | 58415 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3979_1 | HRGMv2_3979_1_47 | 58412 | 59713 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3979_1 | HRGMv2_3979_1_48 | 59710 | 60831 | + | GT4 |
| pfam | HRGMv2_3979_1 | HRGMv2_3979_1_49 | 60841 | 61812 | + | Acyl_transf_3 |
| CAZyme | HRGMv2_3979_1 | HRGMv2_3979_1_50 | 61809 | 62930 | + | GT4 |
| CAZyme | HRGMv2_3979_1 | HRGMv2_3979_1_51 | 63124 | 64239 | + | GT4 |
| TC | HRGMv2_3979_1 | HRGMv2_3979_1_52 | 64227 | 64898 | + | 9.B.18.1.3 |
Gene ID: HRGMv2_3979_1_40
Type: CAZyme
Location: 52450 - 53451 (+)
Type: CAZyme
Location: 52450 - 53451 (+)
Gene ID: HRGMv2_3979_1_41
Type: CAZyme
Location: 53490 - 54452 (+)
Type: CAZyme
Location: 53490 - 54452 (+)
Gene ID: HRGMv2_3979_1_42
Type:
Location: 54580 - 54981 (+)
Type:
Location: 54580 - 54981 (+)
Gene ID: HRGMv2_3979_1_43
Type: pfam
Location: 54971 - 55483 (+)
Type: pfam
Location: 54971 - 55483 (+)
Gene ID: HRGMv2_3979_1_44
Type: CAZyme
Location: 55508 - 56449 (+)
Type: CAZyme
Location: 55508 - 56449 (+)
Gene ID: HRGMv2_3979_1_45
Type: CAZyme
Location: 56461 - 57432 (+)
Type: CAZyme
Location: 56461 - 57432 (+)
Gene ID: HRGMv2_3979_1_46
Type: CAZyme
Location: 57432 - 58415 (+)
Type: CAZyme
Location: 57432 - 58415 (+)
Gene ID: HRGMv2_3979_1_47
Type:
Location: 58412 - 59713 (+)
Type:
Location: 58412 - 59713 (+)
Gene ID: HRGMv2_3979_1_48
Type: CAZyme
Location: 59710 - 60831 (+)
Type: CAZyme
Location: 59710 - 60831 (+)
Gene ID: HRGMv2_3979_1_49
Type: pfam
Location: 60841 - 61812 (+)
Type: pfam
Location: 60841 - 61812 (+)
Gene ID: HRGMv2_3979_1_50
Type: CAZyme
Location: 61809 - 62930 (+)
Type: CAZyme
Location: 61809 - 62930 (+)
Gene ID: HRGMv2_3979_1_51
Type: CAZyme
Location: 63124 - 64239 (+)
Type: CAZyme
Location: 63124 - 64239 (+)
Gene ID: HRGMv2_3979_1_52
Type: TC
Location: 64227 - 64898 (+)
Type: TC
Location: 64227 - 64898 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
UBA4372
Species
UBA4372 sp019420585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.