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Cluster: HRGMv2_3978_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3978_6 HRGMv2_3978_6_43 46923 47615 - 2.A.115.2.14
TC HRGMv2_3978_6 HRGMv2_3978_6_44 47775 50576 - 1.C.105.2.12
NULL(UNKNOWN) HRGMv2_3978_6 HRGMv2_3978_6_45 50844 51368 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_3978_6 HRGMv2_3978_6_46 51495 53141 + C26.964
TC HRGMv2_3978_6 HRGMv2_3978_6_47 53168 55270 + 2.A.9.3.1
pfam HRGMv2_3978_6 HRGMv2_3978_6_48 55297 55809 + Ferritin
CAZyme HRGMv2_3978_6 HRGMv2_3978_6_49 55892 58111 - CBM32 | GH29
pfam HRGMv2_3978_6 HRGMv2_3978_6_50 58286 59461 - Acyl_transf_3
STP HRGMv2_3978_6 HRGMv2_3978_6_51 59535 60098 - cNMP_binding
TC HRGMv2_3978_6 HRGMv2_3978_6_52 60148 60864 - 3.A.25.2.1
STP HRGMv2_3978_6 HRGMv2_3978_6_53 60881 62107 - Aminotran_1_2
pfam HRGMv2_3978_6 HRGMv2_3978_6_54 62130 63503 - SUFBD_core | SufBD_N
TC HRGMv2_3978_6 HRGMv2_3978_6_55 63511 64278 - 3.A.1.128.6
Gene ID: HRGMv2_3978_6_43
Type: TC
Location: 46923 - 47615 (-)
Gene ID: HRGMv2_3978_6_44
Type: TC
Location: 47775 - 50576 (-)
Gene ID: HRGMv2_3978_6_45
Type:
Location: 50844 - 51368 (+)
Gene ID: HRGMv2_3978_6_46
Type: peptidase
Location: 51495 - 53141 (+)
Gene ID: HRGMv2_3978_6_47
Type: TC
Location: 53168 - 55270 (+)
Gene ID: HRGMv2_3978_6_48
Type: pfam
Location: 55297 - 55809 (+)
Gene ID: HRGMv2_3978_6_49
Type: CAZyme
Location: 55892 - 58111 (-)
Gene ID: HRGMv2_3978_6_50
Type: pfam
Location: 58286 - 59461 (-)
Gene ID: HRGMv2_3978_6_51
Type: STP
Location: 59535 - 60098 (-)
Gene ID: HRGMv2_3978_6_52
Type: TC
Location: 60148 - 60864 (-)
Gene ID: HRGMv2_3978_6_53
Type: STP
Location: 60881 - 62107 (-)
Gene ID: HRGMv2_3978_6_54
Type: pfam
Location: 62130 - 63503 (-)
Gene ID: HRGMv2_3978_6_55
Type: TC
Location: 63511 - 64278 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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