Cluster: HRGMv2_3978_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3978
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3978_5 | HRGMv2_3978_5_24 | 33795 | 35063 | + | 9.B.10.1.1 |
| pfam | HRGMv2_3978_5 | HRGMv2_3978_5_25 | 35216 | 36472 | - | Phage_integrase | Phage_int_SAM_5 |
| TC | HRGMv2_3978_5 | HRGMv2_3978_5_26 | 36718 | 39681 | + | 1.B.14.6.2 |
| pfam | HRGMv2_3978_5 | HRGMv2_3978_5_27 | 39708 | 41672 | + | SusD-like | SusD-like_2 |
| NULL(UNKNOWN) | HRGMv2_3978_5 | HRGMv2_3978_5_28 | 42139 | 42567 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3978_5 | HRGMv2_3978_5_29 | 43043 | 44200 | - | GH18 |
Gene ID: HRGMv2_3978_5_24
Type: TC
Location: 33795 - 35063 (+)
Type: TC
Location: 33795 - 35063 (+)
Gene ID: HRGMv2_3978_5_25
Type: pfam
Location: 35216 - 36472 (-)
Type: pfam
Location: 35216 - 36472 (-)
Gene ID: HRGMv2_3978_5_26
Type: TC
Location: 36718 - 39681 (+)
Type: TC
Location: 36718 - 39681 (+)
Gene ID: HRGMv2_3978_5_27
Type: pfam
Location: 39708 - 41672 (+)
Type: pfam
Location: 39708 - 41672 (+)
Gene ID: HRGMv2_3978_5_28
Type:
Location: 42139 - 42567 (-)
Type:
Location: 42139 - 42567 (-)
Gene ID: HRGMv2_3978_5_29
Type: CAZyme
Location: 43043 - 44200 (-)
Type: CAZyme
Location: 43043 - 44200 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Paramuribaculum
Species
Paramuribaculum sp009775605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.