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Cluster: HRGMv2_3977_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3977_308 HRGMv2_3977_308_2 1379 2695 - 3.A.18.1.1
TC HRGMv2_3977_308 HRGMv2_3977_308_3 3129 3857 + 1.B.44.1.1
pfam HRGMv2_3977_308 HRGMv2_3977_308_4 3864 4853 + PorP_SprF
TC HRGMv2_3977_308 HRGMv2_3977_308_5 4864 6309 + 9.A.25.1.1
TC HRGMv2_3977_308 HRGMv2_3977_308_6 6358 7245 + 9.A.25.1.1
TC HRGMv2_3977_308 HRGMv2_3977_308_7 7270 8838 + 9.A.25.1.1
pfam HRGMv2_3977_308 HRGMv2_3977_308_8 8876 10042 + GldN
CAZyme HRGMv2_3977_308 HRGMv2_3977_308_9 10388 11008 + GH43_2
Gene ID: HRGMv2_3977_308_2
Type: TC
Location: 1379 - 2695 (-)
Gene ID: HRGMv2_3977_308_3
Type: TC
Location: 3129 - 3857 (+)
Gene ID: HRGMv2_3977_308_4
Type: pfam
Location: 3864 - 4853 (+)
Gene ID: HRGMv2_3977_308_5
Type: TC
Location: 4864 - 6309 (+)
Gene ID: HRGMv2_3977_308_6
Type: TC
Location: 6358 - 7245 (+)
Gene ID: HRGMv2_3977_308_7
Type: TC
Location: 7270 - 8838 (+)
Gene ID: HRGMv2_3977_308_8
Type: pfam
Location: 8876 - 10042 (+)
Gene ID: HRGMv2_3977_308_9
Type: CAZyme
Location: 10388 - 11008 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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