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Cluster: HRGMv2_3977_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3977_119 HRGMv2_3977_119_1 80 1504 - GH28
TC HRGMv2_3977_119 HRGMv2_3977_119_2 1566 2147 - 3.D.6.1.2
TC HRGMv2_3977_119 HRGMv2_3977_119_3 2150 2737 - 3.D.6.1.2
TC HRGMv2_3977_119 HRGMv2_3977_119_4 2741 3382 - 3.D.6.1.1
TC HRGMv2_3977_119 HRGMv2_3977_119_5 3409 4362 - 3.D.6.1.2
TC HRGMv2_3977_119 HRGMv2_3977_119_6 4391 4978 - 3.D.6.1.1
TC HRGMv2_3977_119 HRGMv2_3977_119_7 4990 5754 - 3.D.6.1.2
Gene ID: HRGMv2_3977_119_1
Type: CAZyme
Location: 80 - 1504 (-)
Gene ID: HRGMv2_3977_119_2
Type: TC
Location: 1566 - 2147 (-)
Gene ID: HRGMv2_3977_119_3
Type: TC
Location: 2150 - 2737 (-)
Gene ID: HRGMv2_3977_119_4
Type: TC
Location: 2741 - 3382 (-)
Gene ID: HRGMv2_3977_119_5
Type: TC
Location: 3409 - 4362 (-)
Gene ID: HRGMv2_3977_119_6
Type: TC
Location: 4391 - 4978 (-)
Gene ID: HRGMv2_3977_119_7
Type: TC
Location: 4990 - 5754 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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