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Cluster: HRGMv2_3977_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3977_81 HRGMv2_3977_81_5 5139 5957 - GT2
CAZyme HRGMv2_3977_81 HRGMv2_3977_81_6 6054 8192 - GT2 | GT8
NULL(UNKNOWN) HRGMv2_3977_81 HRGMv2_3977_81_7 8275 9006 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3977_81 HRGMv2_3977_81_8 9071 9313 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3977_81 HRGMv2_3977_81_9 9857 17332 - 9.A.25.1.1
pfam HRGMv2_3977_81 HRGMv2_3977_81_10 17534 18817 - AcetylCoA_hydro | AcetylCoA_hyd_C
pfam HRGMv2_3977_81 HRGMv2_3977_81_11 19078 23397 - Cleaved_Adhesin | CarboxypepD_reg | CarbopepD_reg_2
CAZyme HRGMv2_3977_81 HRGMv2_3977_81_12 23679 26012 + GH31_16
Gene ID: HRGMv2_3977_81_5
Type: CAZyme
Location: 5139 - 5957 (-)
Gene ID: HRGMv2_3977_81_6
Type: CAZyme
Location: 6054 - 8192 (-)
Gene ID: HRGMv2_3977_81_7
Type:
Location: 8275 - 9006 (-)
Gene ID: HRGMv2_3977_81_8
Type:
Location: 9071 - 9313 (+)
Gene ID: HRGMv2_3977_81_9
Type: TC
Location: 9857 - 17332 (-)
Gene ID: HRGMv2_3977_81_10
Type: pfam
Location: 17534 - 18817 (-)
Gene ID: HRGMv2_3977_81_11
Type: pfam
Location: 19078 - 23397 (-)
Gene ID: HRGMv2_3977_81_12
Type: CAZyme
Location: 23679 - 26012 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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