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Cluster: HRGMv2_3976_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3976_2 HRGMv2_3976_2_12 11509 12603 + GT4
pfam HRGMv2_3976_2 HRGMv2_3976_2_13 12600 14309 + DUF6056
peptidase HRGMv2_3976_2 HRGMv2_3976_2_14 14492 16093 + C26.964
TC HRGMv2_3976_2 HRGMv2_3976_2_15 16136 18232 + 2.A.9.3.4
STP HRGMv2_3976_2 HRGMv2_3976_2_16 18234 19058 + Fer4
sulfatase HRGMv2_3976_2 HRGMv2_3976_2_17 19055 19849 + S1_63
CAZyme HRGMv2_3976_2 HRGMv2_3976_2_18 19943 20932 + GT2
Gene ID: HRGMv2_3976_2_12
Type: CAZyme
Location: 11509 - 12603 (+)
Gene ID: HRGMv2_3976_2_13
Type: pfam
Location: 12600 - 14309 (+)
Gene ID: HRGMv2_3976_2_14
Type: peptidase
Location: 14492 - 16093 (+)
Gene ID: HRGMv2_3976_2_15
Type: TC
Location: 16136 - 18232 (+)
Gene ID: HRGMv2_3976_2_16
Type: STP
Location: 18234 - 19058 (+)
Gene ID: HRGMv2_3976_2_17
Type: sulfatase
Location: 19055 - 19849 (+)
Gene ID: HRGMv2_3976_2_18
Type: CAZyme
Location: 19943 - 20932 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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