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Cluster: HRGMv2_3976_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3976_31 HRGMv2_3976_31_10 11756 13576 + 4.C.1.1.14
pfam HRGMv2_3976_31 HRGMv2_3976_31_11 13874 14995 + RF-1 | PCRF
peptidase HRGMv2_3976_31 HRGMv2_3976_31_12 15095 17950 - M06.UPW
CAZyme HRGMv2_3976_31 HRGMv2_3976_31_13 17991 19040 - GT9
pfam HRGMv2_3976_31 HRGMv2_3976_31_14 19024 19716 - DUF4254
pfam HRGMv2_3976_31 HRGMv2_3976_31_15 19771 21471 + PRK
TC HRGMv2_3976_31 HRGMv2_3976_31_16 21485 22849 + 1.A.26.1.2
Gene ID: HRGMv2_3976_31_10
Type: TC
Location: 11756 - 13576 (+)
Gene ID: HRGMv2_3976_31_11
Type: pfam
Location: 13874 - 14995 (+)
Gene ID: HRGMv2_3976_31_12
Type: peptidase
Location: 15095 - 17950 (-)
Gene ID: HRGMv2_3976_31_13
Type: CAZyme
Location: 17991 - 19040 (-)
Gene ID: HRGMv2_3976_31_14
Type: pfam
Location: 19024 - 19716 (-)
Gene ID: HRGMv2_3976_31_15
Type: pfam
Location: 19771 - 21471 (+)
Gene ID: HRGMv2_3976_31_16
Type: TC
Location: 21485 - 22849 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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