Cluster: HRGMv2_3976_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3976
- CGC Family ID: CGCFAM_00061
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3976_29 | HRGMv2_3976_29_19 | 22601 | 22972 | + | 1.A.43.1.6 |
| NULL(UNKNOWN) | HRGMv2_3976_29 | HRGMv2_3976_29_20 | 23211 | 26576 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3976_29 | HRGMv2_3976_29_21 | 26674 | 28134 | + | GT2 |
| pfam | HRGMv2_3976_29 | HRGMv2_3976_29_22 | 28155 | 29105 | + | DUF4922 |
| pfam | HRGMv2_3976_29 | HRGMv2_3976_29_23 | 29102 | 30223 | + | SpoIID |
| TC | HRGMv2_3976_29 | HRGMv2_3976_29_24 | 30225 | 31565 | + | 2.A.1.25.5 |
Gene ID: HRGMv2_3976_29_19
Type: TC
Location: 22601 - 22972 (+)
Type: TC
Location: 22601 - 22972 (+)
Gene ID: HRGMv2_3976_29_20
Type:
Location: 23211 - 26576 (+)
Type:
Location: 23211 - 26576 (+)
Gene ID: HRGMv2_3976_29_21
Type: CAZyme
Location: 26674 - 28134 (+)
Type: CAZyme
Location: 26674 - 28134 (+)
Gene ID: HRGMv2_3976_29_22
Type: pfam
Location: 28155 - 29105 (+)
Type: pfam
Location: 28155 - 29105 (+)
Gene ID: HRGMv2_3976_29_23
Type: pfam
Location: 29102 - 30223 (+)
Type: pfam
Location: 29102 - 30223 (+)
Gene ID: HRGMv2_3976_29_24
Type: TC
Location: 30225 - 31565 (+)
Type: TC
Location: 30225 - 31565 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp910584125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.