Cluster: HRGMv2_3976_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3976
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3976_24 | HRGMv2_3976_24_19 | 31385 | 32692 | + | GH29 |
| TC | HRGMv2_3976_24 | HRGMv2_3976_24_20 | 32689 | 33429 | + | 9.B.158.1.1 |
| pfam | HRGMv2_3976_24 | HRGMv2_3976_24_21 | 33441 | 36077 | + | Transglut_core |
| TC | HRGMv2_3976_24 | HRGMv2_3976_24_22 | 36077 | 37468 | + | 2.A.38.4.5 |
| STP | HRGMv2_3976_24 | HRGMv2_3976_24_23 | 37651 | 38229 | + | Sigma70_r2 | Sigma70_r4_2 |
| NULL(UNKNOWN) | HRGMv2_3976_24 | HRGMv2_3976_24_24 | 38231 | 38764 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3976_24 | HRGMv2_3976_24_25 | 39292 | 40728 | + | 4.C.1.1.6 |
Gene ID: HRGMv2_3976_24_19
Type: CAZyme
Location: 31385 - 32692 (+)
Type: CAZyme
Location: 31385 - 32692 (+)
Gene ID: HRGMv2_3976_24_20
Type: TC
Location: 32689 - 33429 (+)
Type: TC
Location: 32689 - 33429 (+)
Gene ID: HRGMv2_3976_24_21
Type: pfam
Location: 33441 - 36077 (+)
Type: pfam
Location: 33441 - 36077 (+)
Gene ID: HRGMv2_3976_24_22
Type: TC
Location: 36077 - 37468 (+)
Type: TC
Location: 36077 - 37468 (+)
Gene ID: HRGMv2_3976_24_23
Type: STP
Location: 37651 - 38229 (+)
Type: STP
Location: 37651 - 38229 (+)
Gene ID: HRGMv2_3976_24_24
Type:
Location: 38231 - 38764 (+)
Type:
Location: 38231 - 38764 (+)
Gene ID: HRGMv2_3976_24_25
Type: TC
Location: 39292 - 40728 (+)
Type: TC
Location: 39292 - 40728 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp910584125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.