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Cluster: HRGMv2_3976_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3976_21 HRGMv2_3976_21_19 25203 26642 - 2.A.49.6.1
CAZyme HRGMv2_3976_21 HRGMv2_3976_21_20 26696 28564 - GH13_46
pfam HRGMv2_3976_21 HRGMv2_3976_21_21 29022 29687 + Form_Nir_trans
NULL(UNKNOWN) HRGMv2_3976_21 HRGMv2_3976_21_22 29684 30097 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3976_21 HRGMv2_3976_21_23 30143 30994 - 1.A.30.1.3
NULL(UNKNOWN) HRGMv2_3976_21 HRGMv2_3976_21_24 31154 31672 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3976_21 HRGMv2_3976_21_25 31672 32454 + Acyl-ACP_TE | Acyl-ACP_TE_C
TC HRGMv2_3976_21 HRGMv2_3976_21_26 32373 35537 - 2.A.6.2.16
TC HRGMv2_3976_21 HRGMv2_3976_21_27 35572 36690 - 2.A.6.2.4
TC HRGMv2_3976_21 HRGMv2_3976_21_28 36712 38106 - 3.A.1.105.4
pfam HRGMv2_3976_21 HRGMv2_3976_21_29 38349 39638 + CoA_transf_3
pfam HRGMv2_3976_21 HRGMv2_3976_21_30 39643 41394 + TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
TC HRGMv2_3976_21 HRGMv2_3976_21_31 41510 42499 + 2.A.69.3.5
NULL(UNKNOWN) HRGMv2_3976_21 HRGMv2_3976_21_32 42537 43181 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3976_21 HRGMv2_3976_21_33 43264 44391 + 2.A.86.1.8
Gene ID: HRGMv2_3976_21_19
Type: TC
Location: 25203 - 26642 (-)
Gene ID: HRGMv2_3976_21_20
Type: CAZyme
Location: 26696 - 28564 (-)
Gene ID: HRGMv2_3976_21_21
Type: pfam
Location: 29022 - 29687 (+)
Gene ID: HRGMv2_3976_21_22
Type:
Location: 29684 - 30097 (+)
Gene ID: HRGMv2_3976_21_23
Type: TC
Location: 30143 - 30994 (-)
Gene ID: HRGMv2_3976_21_24
Type:
Location: 31154 - 31672 (+)
Gene ID: HRGMv2_3976_21_25
Type: pfam
Location: 31672 - 32454 (+)
Gene ID: HRGMv2_3976_21_26
Type: TC
Location: 32373 - 35537 (-)
Gene ID: HRGMv2_3976_21_27
Type: TC
Location: 35572 - 36690 (-)
Gene ID: HRGMv2_3976_21_28
Type: TC
Location: 36712 - 38106 (-)
Gene ID: HRGMv2_3976_21_29
Type: pfam
Location: 38349 - 39638 (+)
Gene ID: HRGMv2_3976_21_30
Type: pfam
Location: 39643 - 41394 (+)
Gene ID: HRGMv2_3976_21_31
Type: TC
Location: 41510 - 42499 (+)
Gene ID: HRGMv2_3976_21_32
Type:
Location: 42537 - 43181 (+)
Gene ID: HRGMv2_3976_21_33
Type: TC
Location: 43264 - 44391 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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