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Cluster: HRGMv2_3976_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3976_17 HRGMv2_3976_17_3 1422 2591 - 3.B.1.1.3
pfam HRGMv2_3976_17 HRGMv2_3976_17_4 2620 3060 - Biotin_lipoyl
pfam HRGMv2_3976_17 HRGMv2_3976_17_5 3122 3721 - OAD_gamma
TC HRGMv2_3976_17 HRGMv2_3976_17_6 3778 5331 - 3.B.1.1.2
STP HRGMv2_3976_17 HRGMv2_3976_17_7 5405 5824 - Glyoxalase
pfam HRGMv2_3976_17 HRGMv2_3976_17_8 6199 7194 + Hexapep | Hexapep | LpxD | Hexapep_2
CAZyme HRGMv2_3976_17 HRGMv2_3976_17_9 7214 8599 + CE11
Gene ID: HRGMv2_3976_17_3
Type: TC
Location: 1422 - 2591 (-)
Gene ID: HRGMv2_3976_17_4
Type: pfam
Location: 2620 - 3060 (-)
Gene ID: HRGMv2_3976_17_5
Type: pfam
Location: 3122 - 3721 (-)
Gene ID: HRGMv2_3976_17_6
Type: TC
Location: 3778 - 5331 (-)
Gene ID: HRGMv2_3976_17_7
Type: STP
Location: 5405 - 5824 (-)
Gene ID: HRGMv2_3976_17_8
Type: pfam
Location: 6199 - 7194 (+)
Gene ID: HRGMv2_3976_17_9
Type: CAZyme
Location: 7214 - 8599 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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