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Cluster: HRGMv2_3976_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3976_8 HRGMv2_3976_8_4 3109 5367 + 1.B.14.8.7
NULL(UNKNOWN) HRGMv2_3976_8 HRGMv2_3976_8_5 5464 6384 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3976_8 HRGMv2_3976_8_6 6631 7002 + 3.D.1.8.1
TC HRGMv2_3976_8 HRGMv2_3976_8_7 6993 7607 + 3.D.1.3.1
TC HRGMv2_3976_8 HRGMv2_3976_8_8 7648 9273 + 3.D.1.5.1
TC HRGMv2_3976_8 HRGMv2_3976_8_9 9343 10422 + 3.D.1.5.1
TC HRGMv2_3976_8 HRGMv2_3976_8_10 10535 12037 + 3.A.2.1.2
pfam HRGMv2_3976_8 HRGMv2_3976_8_11 12083 12319 + ATP-synt_DE_N
TC HRGMv2_3976_8 HRGMv2_3976_8_12 12353 13741 + 3.A.2.1.7
TC HRGMv2_3976_8 HRGMv2_3976_8_13 13793 14050 + 3.A.2.1.6
pfam HRGMv2_3976_8 HRGMv2_3976_8_14 14094 14588 + ATP-synt_B | YMF19 | Mt_ATP-synt_B
pfam HRGMv2_3976_8 HRGMv2_3976_8_15 14868 15134 + OSCP
TC HRGMv2_3976_8 HRGMv2_3976_8_16 15139 16719 + 3.A.2.1.2
pfam HRGMv2_3976_8 HRGMv2_3976_8_17 16756 17643 + ATP-synt
STP HRGMv2_3976_8 HRGMv2_3976_8_18 17679 18305 + Fer4 | Fer4
TC HRGMv2_3976_8 HRGMv2_3976_8_19 18354 18881 + 3.D.9.1.1
TC HRGMv2_3976_8 HRGMv2_3976_8_20 18906 19205 + 3.D.1.2.1
TC HRGMv2_3976_8 HRGMv2_3976_8_21 19208 21193 + 3.D.9.1.1
TC HRGMv2_3976_8 HRGMv2_3976_8_22 21221 22735 + 3.D.1.2.1
TC HRGMv2_3976_8 HRGMv2_3976_8_23 22781 24244 + 3.D.9.1.1
pfam HRGMv2_3976_8 HRGMv2_3976_8_24 24769 25044 - ABM
CAZyme HRGMv2_3976_8 HRGMv2_3976_8_25 25053 26501 - GH57
CAZyme HRGMv2_3976_8 HRGMv2_3976_8_26 26537 27778 - GT4
CAZyme HRGMv2_3976_8 HRGMv2_3976_8_27 27829 29790 - GH133
TC HRGMv2_3976_8 HRGMv2_3976_8_28 29987 31387 - 9.B.126.2.2
Gene ID: HRGMv2_3976_8_4
Type: TC
Location: 3109 - 5367 (+)
Gene ID: HRGMv2_3976_8_5
Type:
Location: 5464 - 6384 (+)
Gene ID: HRGMv2_3976_8_6
Type: TC
Location: 6631 - 7002 (+)
Gene ID: HRGMv2_3976_8_7
Type: TC
Location: 6993 - 7607 (+)
Gene ID: HRGMv2_3976_8_8
Type: TC
Location: 7648 - 9273 (+)
Gene ID: HRGMv2_3976_8_9
Type: TC
Location: 9343 - 10422 (+)
Gene ID: HRGMv2_3976_8_10
Type: TC
Location: 10535 - 12037 (+)
Gene ID: HRGMv2_3976_8_11
Type: pfam
Location: 12083 - 12319 (+)
Gene ID: HRGMv2_3976_8_12
Type: TC
Location: 12353 - 13741 (+)
Gene ID: HRGMv2_3976_8_13
Type: TC
Location: 13793 - 14050 (+)
Gene ID: HRGMv2_3976_8_14
Type: pfam
Location: 14094 - 14588 (+)
Gene ID: HRGMv2_3976_8_15
Type: pfam
Location: 14868 - 15134 (+)
Gene ID: HRGMv2_3976_8_16
Type: TC
Location: 15139 - 16719 (+)
Gene ID: HRGMv2_3976_8_17
Type: pfam
Location: 16756 - 17643 (+)
Gene ID: HRGMv2_3976_8_18
Type: STP
Location: 17679 - 18305 (+)
Gene ID: HRGMv2_3976_8_19
Type: TC
Location: 18354 - 18881 (+)
Gene ID: HRGMv2_3976_8_20
Type: TC
Location: 18906 - 19205 (+)
Gene ID: HRGMv2_3976_8_21
Type: TC
Location: 19208 - 21193 (+)
Gene ID: HRGMv2_3976_8_22
Type: TC
Location: 21221 - 22735 (+)
Gene ID: HRGMv2_3976_8_23
Type: TC
Location: 22781 - 24244 (+)
Gene ID: HRGMv2_3976_8_24
Type: pfam
Location: 24769 - 25044 (-)
Gene ID: HRGMv2_3976_8_25
Type: CAZyme
Location: 25053 - 26501 (-)
Gene ID: HRGMv2_3976_8_26
Type: CAZyme
Location: 26537 - 27778 (-)
Gene ID: HRGMv2_3976_8_27
Type: CAZyme
Location: 27829 - 29790 (-)
Gene ID: HRGMv2_3976_8_28
Type: TC
Location: 29987 - 31387 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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