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Cluster: HRGMv2_3902_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3902_8 HRGMv2_3902_8_1 136 2061 - 3.A.1.121.4
NULL(UNKNOWN) HRGMv2_3902_8 HRGMv2_3902_8_2 2166 2321 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3902_8 HRGMv2_3902_8_3 2351 3835 - tRNA-synt_2b | HGTP_anticodon | ProRS-C_1
TC HRGMv2_3902_8 HRGMv2_3902_8_4 4155 4877 + 9.B.186.1.3
pfam HRGMv2_3902_8 HRGMv2_3902_8_5 5208 6368 - GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg
TC HRGMv2_3902_8 HRGMv2_3902_8_6 6462 7739 - 2.A.1.7.8
sulfatase HRGMv2_3902_8 HRGMv2_3902_8_7 7854 8942 - S1_22
CAZyme HRGMv2_3902_8 HRGMv2_3902_8_8 9420 13307 + GT2
Gene ID: HRGMv2_3902_8_1
Type: TC
Location: 136 - 2061 (-)
Gene ID: HRGMv2_3902_8_2
Type:
Location: 2166 - 2321 (+)
Gene ID: HRGMv2_3902_8_3
Type: pfam
Location: 2351 - 3835 (-)
Gene ID: HRGMv2_3902_8_4
Type: TC
Location: 4155 - 4877 (+)
Gene ID: HRGMv2_3902_8_5
Type: pfam
Location: 5208 - 6368 (-)
Gene ID: HRGMv2_3902_8_6
Type: TC
Location: 6462 - 7739 (-)
Gene ID: HRGMv2_3902_8_7
Type: sulfatase
Location: 7854 - 8942 (-)
Gene ID: HRGMv2_3902_8_8
Type: CAZyme
Location: 9420 - 13307 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Alloprevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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