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Cluster: HRGMv2_3901_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3901_14 HRGMv2_3901_14_9 8766 11321 - GH31_15
NULL(UNKNOWN) HRGMv2_3901_14 HRGMv2_3901_14_10 11369 11482 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3901_14 HRGMv2_3901_14_11 11487 11681 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3901_14 HRGMv2_3901_14_12 11694 14687 + 1.B.14.6.1
TC HRGMv2_3901_14 HRGMv2_3901_14_13 14702 16180 + 8.A.46.1.3
pfam HRGMv2_3901_14 HRGMv2_3901_14_14 16215 17702 + SusE | SusF_SusE | SusF_SusE | SusF_SusE
CAZyme HRGMv2_3901_14 HRGMv2_3901_14_15 17718 19481 + GH66
CAZyme HRGMv2_3901_14 HRGMv2_3901_14_16 19499 21604 + GH97
Gene ID: HRGMv2_3901_14_9
Type: CAZyme
Location: 8766 - 11321 (-)
Gene ID: HRGMv2_3901_14_10
Type:
Location: 11369 - 11482 (+)
Gene ID: HRGMv2_3901_14_11
Type:
Location: 11487 - 11681 (+)
Gene ID: HRGMv2_3901_14_12
Type: TC
Location: 11694 - 14687 (+)
Gene ID: HRGMv2_3901_14_13
Type: TC
Location: 14702 - 16180 (+)
Gene ID: HRGMv2_3901_14_14
Type: pfam
Location: 16215 - 17702 (+)
Gene ID: HRGMv2_3901_14_15
Type: CAZyme
Location: 17718 - 19481 (+)
Gene ID: HRGMv2_3901_14_16
Type: CAZyme
Location: 19499 - 21604 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Limisoma
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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