Cluster: HRGMv2_3901_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3901
- CGC Family ID: CGCFAM_00145
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3901_6 | HRGMv2_3901_6_21 | 23439 | 24959 | - | GH128 |
| CAZyme | HRGMv2_3901_6 | HRGMv2_3901_6_22 | 24965 | 25822 | - | GH16_3 |
| CAZyme | HRGMv2_3901_6 | HRGMv2_3901_6_23 | 25833 | 27014 | - | GH16_3 |
| NULL(UNKNOWN) | HRGMv2_3901_6 | HRGMv2_3901_6_24 | 27159 | 28085 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3901_6 | HRGMv2_3901_6_25 | 28200 | 29780 | - | 8.A.46.1.5 |
| TC | HRGMv2_3901_6 | HRGMv2_3901_6_26 | 29798 | 32914 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_3901_6_21
Type: CAZyme
Location: 23439 - 24959 (-)
Type: CAZyme
Location: 23439 - 24959 (-)
Gene ID: HRGMv2_3901_6_22
Type: CAZyme
Location: 24965 - 25822 (-)
Type: CAZyme
Location: 24965 - 25822 (-)
Gene ID: HRGMv2_3901_6_23
Type: CAZyme
Location: 25833 - 27014 (-)
Type: CAZyme
Location: 25833 - 27014 (-)
Gene ID: HRGMv2_3901_6_24
Type:
Location: 27159 - 28085 (-)
Type:
Location: 27159 - 28085 (-)
Gene ID: HRGMv2_3901_6_25
Type: TC
Location: 28200 - 29780 (-)
Type: TC
Location: 28200 - 29780 (-)
Gene ID: HRGMv2_3901_6_26
Type: TC
Location: 29798 - 32914 (-)
Type: TC
Location: 29798 - 32914 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Limisoma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.