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Cluster: HRGMv2_3901_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3901_28 HRGMv2_3901_28_11 10986 12365 + 9.B.18.1.1
pfam HRGMv2_3901_28 HRGMv2_3901_28_12 12393 13499 + Lipase_GDSL_3 | GxDLY
TC HRGMv2_3901_28 HRGMv2_3901_28_13 13592 14272 + 2.A.88.8.1
pfam HRGMv2_3901_28 HRGMv2_3901_28_14 14276 14983 + Hydrolase | Hydrolase_like | HAD_2
pfam HRGMv2_3901_28 HRGMv2_3901_28_15 15008 16936 - CN_hydrolase | NAD_synthase
CAZyme HRGMv2_3901_28 HRGMv2_3901_28_16 16949 17917 - GT2
Gene ID: HRGMv2_3901_28_11
Type: TC
Location: 10986 - 12365 (+)
Gene ID: HRGMv2_3901_28_12
Type: pfam
Location: 12393 - 13499 (+)
Gene ID: HRGMv2_3901_28_13
Type: TC
Location: 13592 - 14272 (+)
Gene ID: HRGMv2_3901_28_14
Type: pfam
Location: 14276 - 14983 (+)
Gene ID: HRGMv2_3901_28_15
Type: pfam
Location: 15008 - 16936 (-)
Gene ID: HRGMv2_3901_28_16
Type: CAZyme
Location: 16949 - 17917 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Limisoma
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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