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Cluster: HRGMv2_3900_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3900_12 HRGMv2_3900_12_1 108 1592 - 2.A.36.6.11
NULL(UNKNOWN) HRGMv2_3900_12 HRGMv2_3900_12_2 1651 1779 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3900_12 HRGMv2_3900_12_3 1763 2368 + DUF4254
CAZyme HRGMv2_3900_12 HRGMv2_3900_12_4 2355 3431 + GT9
STP HRGMv2_3900_12 HRGMv2_3900_12_5 3445 4482 + AAA
pfam HRGMv2_3900_12 HRGMv2_3900_12_6 4515 6008 + Polysacc_synt | Polysacc_synt_3
TC HRGMv2_3900_12 HRGMv2_3900_12_7 6045 7460 + 9.B.145.1.2
CAZyme HRGMv2_3900_12 HRGMv2_3900_12_8 7487 8575 + GT4
Gene ID: HRGMv2_3900_12_1
Type: TC
Location: 108 - 1592 (-)
Gene ID: HRGMv2_3900_12_2
Type:
Location: 1651 - 1779 (+)
Gene ID: HRGMv2_3900_12_3
Type: pfam
Location: 1763 - 2368 (+)
Gene ID: HRGMv2_3900_12_4
Type: CAZyme
Location: 2355 - 3431 (+)
Gene ID: HRGMv2_3900_12_5
Type: STP
Location: 3445 - 4482 (+)
Gene ID: HRGMv2_3900_12_6
Type: pfam
Location: 4515 - 6008 (+)
Gene ID: HRGMv2_3900_12_7
Type: TC
Location: 6045 - 7460 (+)
Gene ID: HRGMv2_3900_12_8
Type: CAZyme
Location: 7487 - 8575 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Muribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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