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Cluster: HRGMv2_3900_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3900_8 HRGMv2_3900_8_10 6234 8801 - CBM57 | GH2
TC HRGMv2_3900_8 HRGMv2_3900_8_11 9087 12278 + 1.B.14.6.1
pfam HRGMv2_3900_8 HRGMv2_3900_8_12 12308 14314 + SusD_RagB | SusD-like_3
TF HRGMv2_3900_8 HRGMv2_3900_8_13 14457 18692 + HTH_AraC
TC HRGMv2_3900_8 HRGMv2_3900_8_14 18711 19421 - 3.A.1.23.8
pfam HRGMv2_3900_8 HRGMv2_3900_8_15 19418 20224 - CbiQ
TC HRGMv2_3900_8 HRGMv2_3900_8_16 20239 21210 - 3.A.1.23.5
pfam HRGMv2_3900_8 HRGMv2_3900_8_17 21447 21899 - LacAB_rpiB
TC HRGMv2_3900_8 HRGMv2_3900_8_18 21928 23754 - 3.A.1.106.1
Gene ID: HRGMv2_3900_8_10
Type: CAZyme
Location: 6234 - 8801 (-)
Gene ID: HRGMv2_3900_8_11
Type: TC
Location: 9087 - 12278 (+)
Gene ID: HRGMv2_3900_8_12
Type: pfam
Location: 12308 - 14314 (+)
Gene ID: HRGMv2_3900_8_13
Type: TF
Location: 14457 - 18692 (+)
Gene ID: HRGMv2_3900_8_14
Type: TC
Location: 18711 - 19421 (-)
Gene ID: HRGMv2_3900_8_15
Type: pfam
Location: 19418 - 20224 (-)
Gene ID: HRGMv2_3900_8_16
Type: TC
Location: 20239 - 21210 (-)
Gene ID: HRGMv2_3900_8_17
Type: pfam
Location: 21447 - 21899 (-)
Gene ID: HRGMv2_3900_8_18
Type: TC
Location: 21928 - 23754 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Muribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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